PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG066290.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 160aa    MW: 17056.2 Da    PI: 10.9467
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG066290.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00039133156123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       ++C+ C+++Fs+   L  H r  H
  TRIDC3BG066290.4 133 HVCNSCNRTFSSLKGLGDHSRAkH 156
                       79************9999988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MNNLRAGYVH VATPHPAAKQ ARKSGDHVHV ATPHPAIKQA RKSGDHVHVA TPHPAAKQAH  60
KSGEHVHVAT PHPAAKQARK SVDRVHVATP HPAAKQACKS GDHVHVVTPH PAAKHARKTL  120
ENNDDKSKQS AGHVCNSCNR TFSSLKGLGD HSRAKHGDAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.12e-06C2H2 family protein