PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG066290.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 410aa    MW: 44374.5 Da    PI: 9.7463
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG066290.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.0014383406123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       ++C+ C+++Fs+   L  H r  H
  TRIDC3BG066290.3 383 HVCNSCNRTFSSLKGLGDHSRAkH 406
                       79************9999988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
AATVSARTLG KPRRRRGGSS RPPSPGKMTE NHRFWGVVVK PGETVKCDPG DSYYHISTIA  60
LEAGKAEEDV QVFVKIDDTR IMLGTLSVDN HPHVLADLVF KKEFELLHSS MTSNISFMGY  120
KFDIMKRSHS CTKQDAESDE EVPLAIPLDF NTDGYKDNEA AHGANNLIAP RPADAPSSIP  180
MAKVEGTNSP GKQKGDDKDK TGMQNSSDGV DNESSDQDVD YPRKRTKDDY NPMETPLNTP  240
QGKRAKIATP TTGNKTGYVH VATPHPAAKQ ARKSGDHVHV ATPHPAIKQA RKSGDHVHVA  300
TPHPAAKQAH KSGEHVHVAT PHPAAKQARK SVDRVHVATP HPAAKQACKS GDHVHVVTPH  360
PAAKHARKTL ENNDDKSKQS AGHVCNSCNR TFSSLKGLGD HSRAKHGDAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.21e-15C2H2 family protein