PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG065650.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 689aa MW: 77264.8 Da PI: 9.5053

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG065650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	571	593	1	21
EEET..TTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHir 21 y+C+ C++sF +k +L H r TRIDC3BG065650.1 571 YTCTieGCSMSFDTKKELSLHER 593 99*******************98 PP
2	zf-C2H2	13.3	0.00024	595	618	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +Cp Cgk F ++ +L +H ++H TRIDC3BG065650.1 595 TCPvkGCGKKFFTHKYLLQHRKVH 618 79999*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MIIIRSMISL LILEGVIWQM QLEVKGPMLK KSRTVADSML VETNIHGCPG FELHGTEILP 60 DAGPVTDSAP DLLASAYGNQ PDTDEHNRNK KIKVSHDSSE LDGTKIPSSS IKCQQRPSSQ 120 SSQCIGGSSI SNGPRGVRTR NKYQLKMALS QGFQLKNNYW TMEQKVQPEP TRSKETVKEP 180 LDASGADNDA RCSTAISVGG PRISTTTMDS LNKPIVKIDK DSARMHVFCL EHAVEVEKQL 240 QAIGGAHVIL LCRPEYLRIE AEARSLAAEL EVEHGWKDIH FREANMEDRK MIEELQQDEE 300 SIPTSSDWAV KLGTNLYYSA NLAKSPLHNK QIPYNRVIYR AFGRSSPDNS PVKLENCEGS 360 RDTQKKIVLA GRWCGKAWMS NQVHPFLAQR IESSELEETD KSSGVEASKR NSSTITDVPK 420 SSSKKRENMA VEVTTDTKRP RLAKGYSSKA LKGVAEVSHP SPTAVVPRVS SRIADRANRL 480 KSEMTEEPKA TSHSRTRPPK KFEVEAKKQM KMRKEDKMMA PTAPKDDEER PSATKGGPSV 540 GPATKLETKQ LKKATGEERA PRDHRMRVEG YTCTIEGCSM SFDTKKELSL HERDTCPVKG 600 CGKKFFTHKY LLQHRKVHTD DRPLKCPWEG CDVAFKWAWA RTEHLRVHTG DRPYVCREPG 660 CAETFRFISD FSRHKRETGH STKQTKTKT

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MIIIRSMISL LILEGVIWQM QLEVKGPMLK KSRTVADSML VETNIHGCPG FELHGTEILP  60
DAGPVTDSAP DLLASAYGNQ PDTDEHNRNK KIKVSHDSSE LDGTKIPSSS IKCQQRPSSQ  120
SSQCIGGSSI SNGPRGVRTR NKYQLKMALS QGFQLKNNYW TMEQKVQPEP TRSKETVKEP  180
LDASGADNDA RCSTAISVGG PRISTTTMDS LNKPIVKIDK DSARMHVFCL EHAVEVEKQL  240
QAIGGAHVIL LCRPEYLRIE AEARSLAAEL EVEHGWKDIH FREANMEDRK MIEELQQDEE  300
SIPTSSDWAV KLGTNLYYSA NLAKSPLHNK QIPYNRVIYR AFGRSSPDNS PVKLENCEGS  360
RDTQKKIVLA GRWCGKAWMS NQVHPFLAQR IESSELEETD KSSGVEASKR NSSTITDVPK  420
SSSKKRENMA VEVTTDTKRP RLAKGYSSKA LKGVAEVSHP SPTAVVPRVS SRIADRANRL  480
KSEMTEEPKA TSHSRTRPPK KFEVEAKKQM KMRKEDKMMA PTAPKDDEER PSATKGGPSV  540
GPATKLETKQ LKKATGEERA PRDHRMRVEG YTCTIEGCSM SFDTKKELSL HERDTCPVKG  600
CGKKFFTHKY LLQHRKVHTD DRPLKCPWEG CDVAFKWAWA RTEHLRVHTG DRPYVCREPG  660
CAETFRFISD FSRHKRETGH STKQTKTKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	3e-58	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG065650.1