PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG064630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 172aa MW: 17725.6 Da PI: 8.0514 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.8 | 9.9e-17 | 21 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr+++ +g+Wv+eIr+p + r r +lg++ t+e Aa a++ a l+g TRIDC3BG064630.1 21 CRYKGVRRRR-WGKWVSEIRVPGT---RERLWLGSYATPEAAAVAHDTAVYFLRG 71 78*****777.**********943...5*********************999998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 172 aa Download sequence |
WSEMSSAAEA SAARGGEEER CRYKGVRRRR WGKWVSEIRV PGTRERLWLG SYATPEAAAV 60 AHDTAVYFLR GGGNGAAGLN FPERAAAAYG AGCVAPLSPR SVQSVASDAG MAADAQLVAA 120 RDGAPRQCYA EARAGAGAAQ GGANARHADG GGGSRGQLVS GELSVDDMEI LM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71520.1 | 1e-28 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG064630.1 |