PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG062710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 304aa    MW: 33885.4 Da    PI: 6.2468
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG062710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind99.82.5e-31211122102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y+++ d++++ l++w +++nsf+v+d   f++ +Lp +Fkh n++SFvRQLn YgF+kv+ ++         weF+h+sF +g+++ll
  TRIDC3BG062710.3  21 FVAKTYQMVCDPRTDALVRWGRDNNSFLVTDVAGFSQLLLPCFFKHGNLSSFVRQLNSYGFRKVHPDR---------WEFAHESFLRGQTHLL 104
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                        +i r+k+
  TRIDC3BG062710.3 105 PRIVRRKK 112
                       *****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDGLHTELAL GLIGELETAP FVAKTYQMVC DPRTDALVRW GRDNNSFLVT DVAGFSQLLL  60
PCFFKHGNLS SFVRQLNSYG FRKVHPDRWE FAHESFLRGQ THLLPRIVRR KKRGEASSSA  120
LVGSGEQYVV ANIGEEVEEE EDDEGREALL EEVRRLRQEQ TAVGEQLAQM ARRLQATERR  180
SDRLMPLLAR LDEDPRATSL HLLQQAAEKK RQHTQLHSRD FASFPIAPPL HPAPSPLLAM  240
GGARVGQWAE PMPLKLTTFK QTSASSGVQQ VPEFEGGGSG MGLTDSGTAE ETPFPFCLLG  300
QCFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-46HSF family protein