PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG062450.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 549aa MW: 60772.5 Da PI: 5.2556 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 81.8 | 7.8e-26 | 156 | 209 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+gLt+e+v+SHLQkYRl TRIDC3BG062450.3 156 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPGLTRENVASHLQKYRL 209 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 40.5 | 6.3e-13 | 158 | 208 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ g+t++++ s++qky+ TRIDC3BG062450.3 158 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPGLTRENVASHLQKYR 208 678***********************************************7 PP | |||||||
3 | Response_reg | 57.4 | 8.1e-20 | 3 | 86 | 27 | 109 |
EEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 27 aeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +++ ++ ale+l+e++ +D+++ D++mp+mdG++ll++i e +lp+i+++ ge + + + ++ Ga d+l Kp+ ++el++ TRIDC3BG062450.3 3 TTCGLARVALEILRERKnrFDIVISDVNMPDMDGFKLLEHIGLEM-DLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 86 5666678899999777777**********************6654.8***********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
AVTTCGLARV ALEILRERKN RFDIVISDVN MPDMDGFKLL EHIGLEMDLP VIMMSIDGET 60 SRVMKGVQHG ACDYLLKPVR MKELRNIWQH VYRKKMHEVK EIEGHDSCDD LQILRYGFEG 120 FDEKGLFMTV DSDATRKRKD VDHGDQDSSD GATAKKARVV WSVDLHQKFV NAVNQIGFDK 180 VGPKKILDLM NVPGLTRENV ASHLQKYRLY LGRLQKQNEE RLLGSARQDF STKGPSSENL 240 NLRSSFQEQP SNTSSGYPHA SQKIQGQSSV SDSQLEETKR MVPLPAPDRS MNSVSSAAEP 300 QNVAGVSPIG GVLSFKGLPV NQDRKPSETM ILECQAWTGG VPAKQFMQYP KHNHARCDLL 360 GDYACLPKPD LEHPTAPGHL FTPPPLISMS CSTEMDARNF SDVKPALVDC IKSFSPALTC 420 TADSVSVQIS DSVVTSTDAA DRKFSSVEGL PTTKDCYFGQ TSNQGSWLRS QEEPSIICGA 480 DFASLPEDLP GYPLQGGVSF ENVGLSSIDL FHYNDAMILS GLQSNWYDDQ DHFSSETTDY 540 PLMDGCLFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 3e-92 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG062450.3 |