PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG062180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 292aa    MW: 31927.2 Da    PI: 9.9872
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG062180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.63.2e-16212218128
               NAM  18 yLkkkvegkk..leleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkgel 99 
                       yL+++++ ++    ++++++e+d+y ++P +L +       ++++e+k+wyfFs  + k+a+++rk+r++   +g+Wk+    ++v++++g++
  TRIDC3BG062180.1   2 YLRPRISCQPlpDAAKQFFHEADVYATDPASLVSgrlpgpaRAQGESKNWYFFSLVKPKSAQNSRKSRTVGggKGTWKQERG-NDVVDAEGHA 93 
                       9999*9999954334556**************6446788877788899********************87656899**8876.5666669*** PP

               NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                       vg  + +++  + +++ +  +W+m e+++
  TRIDC3BG062180.1  94 VGRFEKFTYTPNPKEDKKPPEWLMMEFSV 122
                       **********9988888999*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
FYLRPRISCQ PLPDAAKQFF HEADVYATDP ASLVSGRLPG PARAQGESKN WYFFSLVKPK  60
SAQNSRKSRT VGGGKGTWKQ ERGNDVVDAE GHAVGRFEKF TYTPNPKEDK KPPEWLMMEF  120
SVGQEDGGQP RPVLCLCKIY QSPRFLRVRA QEEDAGRRPS AFSVISARVC AQEEQAPHGR  180
IIRSQAAAPV SVVASSIKSA AARAFAPSFR TKSRGGTGRR LGEDSCGPRD ELVLGRAICA  240
LALLNDGSGT GPAGILPWKS VRLTEFLHTT AISEDVHLRP LYCFSYSAKS LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-08NAC family protein