PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG061100.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 365aa    MW: 38959.8 Da    PI: 11.2946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG061100.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19130179255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a++ a+++++g
  TRIDC3BG061100.4 130 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDDAALRFRG 179
                       7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
RQWRARRTSC RATTRRRRCR RWCRRCRGSW RRTTRGRRPA PAPGRRGGAG RSSRQCTPPE  60
EAATCTSWGA SPARHLQSSQ RINMLPRPCA GSDQSSDTQS ASASAATMEE HRSRSPASSN  120
VEAAEAPRRR YRGVRQRPWG KWAAEIRDPH KAARVWLGTF ETAEAAARAY DDAALRFRGS  180
RAKLNFPEDA RLHPATVAPA AAPARVPIAA ASASTPGMYA GAGPASDYLR YQMLLQGRGA  240
AANQGNLLSF YGGGGGGGGM SSSYGGGMSS SYGGGGGTMS GFLGSYYSFP TSSVSVATVP  300
SSSSASSAPG HYYSSPHDSQ QHQQQQGNAA AEWSWESALA PYPGTTTAAS WSDSSQQPYH  360
PPHTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.15e-15ERF family protein