PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG060860.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 231aa    MW: 26254 Da    PI: 9.9758
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG060860.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.89.1e-36151572128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra............ 77 
                       p+G++F+Ptd+el+ e+L+ kv ++ ++l +    +i+   +i++++P++Lp  v+ + ++ +fF++ +k+y+tg+rk+r+            
  TRIDC3BG060860.3  15 PAGVKFDPTDQELI-EHLESKVMKRAHSLIDdfipTIEGEdGICYTHPEKLP-GVTRNGQSKHFFHRPSKAYTTGTRKRRKihaenelsnskn 105
                       89************.99*****99996654423223555545**********.555667899******************8788988888665 PP

               NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        ++ +W++tgk++++++ +g+++g+kk+Lv+y   g+a+k+ekt+Wvmh+y+l
  TRIDC3BG060860.3 106 GAETRWHKTGKTRPLMV-DGRHKGCKKILVLYsnFGKARKPEKTNWVMHQYHL 157
                       44678************.999***********544799*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSCCRYRKKD MVGFPAGVKF DPTDQELIEH LESKVMKRAH SLIDDFIPTI EGEDGICYTH  60
PEKLPGVTRN GQSKHFFHRP SKAYTTGTRK RRKIHAENEL SNSKNGAETR WHKTGKTRPL  120
MVDGRHKGCK KILVLYSNFG KARKPEKTNW VMHQYHLGDL EDEKEGELIV SKVFYQTQPR  180
QSAAATTSTV LHEPSTNGDM EVKTPKSMKI GLADYAVVAA AAIQMQRQQQ Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.12e-93NAC family protein