PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG060860.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 393aa MW: 43986.9 Da PI: 8.6385

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG060860.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	112.9	3.4e-35	118	260	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra............ 77 p+G++F+Ptd+el+ e+L+ kv ++ ++l + +i+ +i++++P++Lp v+ + ++ +fF++ +k+y+tg+rk+r+ TRIDC3BG060860.1 118 PAGVKFDPTDQELI-EHLESKVMKRAHSLIDdfipTIEGEdGICYTHPEKLP-GVTRNGQSKHFFHRPSKAYTTGTRKRRKihaenelsnskn 208 89**********.99*99996654423223555545******.555667899**************8788988888665 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++ +W++tgk++++++ +g+++g+kk+Lv+y g+a+k+ekt+Wvmh+y+l TRIDC3BG060860.1 209 GAETRWHKTGKTRPLMV-DGRHKGCKKILVLYsnFGKARKPEKTNWVMHQYHL 260 44678********.999*******544799***********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
PPQHAKSPTS LCCLALQGRA VPRTDIHHLD LLLFLSSAAP PLRLSPTPST AWIDPPAAPG 60 ASENRLSTLH QLMDKGHPGY FKSMMDAKLQ EQGFFASQHC VNCGHELDYK PKDMVGFPAG 120 VKFDPTDQEL IEHLESKVMK RAHSLIDDFI PTIEGEDGIC YTHPEKLPGV TRNGQSKHFF 180 HRPSKAYTTG TRKRRKIHAE NELSNSKNGA ETRWHKTGKT RPLMVDGRHK GCKKILVLYS 240 NFGKARKPEK TNWVMHQYHL GDLEDEKEGE LIVSKVFYQT QPRQSAAATT STVLHEPSTN 300 GDMEVKTPKS MKIGLADYAV VAAAAIQMQR QQQQMLKQGD EMNKGNEVQD QQQQKFDHRP 360 AGLEGPIMAC KSASTKEGTS TTQPEDVQWP YQY

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

PPQHAKSPTS LCCLALQGRA VPRTDIHHLD LLLFLSSAAP PLRLSPTPST AWIDPPAAPG  60
ASENRLSTLH QLMDKGHPGY FKSMMDAKLQ EQGFFASQHC VNCGHELDYK PKDMVGFPAG  120
VKFDPTDQEL IEHLESKVMK RAHSLIDDFI PTIEGEDGIC YTHPEKLPGV TRNGQSKHFF  180
HRPSKAYTTG TRKRRKIHAE NELSNSKNGA ETRWHKTGKT RPLMVDGRHK GCKKILVLYS  240
NFGKARKPEK TNWVMHQYHL GDLEDEKEGE LIVSKVFYQT QPRQSAAATT STVLHEPSTN  300
GDMEVKTPKS MKIGLADYAV VAAAAIQMQR QQQQMLKQGD EMNKGNEVQD QQQQKFDHRP  360
AGLEGPIMAC KSASTKEGTS TTQPEDVQWP YQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-101	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG060860.1