PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG060470.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 176aa    MW: 20209.4 Da    PI: 7.7227
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG060470.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-081359145
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      r +W +eEd+ +  a  +l+ +   +W+++a++++ gRt+ +  +++q
  TRIDC3BG060470.1 13 RRPWAKEEDKAFEAALVMLPDHapdRWERVAARLP-GRTPQEAWEHYQ 59
                      679*****************99*************.****98777777 PP
2Myb_DNA-binding45.81.4e-14109153347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W++eE++l++d+ +++G g+W+ I+r     Rt+ q+ s+ qky
  TRIDC3BG060470.1 109 PWSEEEHKLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 153
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MDFYYQQAGP PARRPWAKEE DKAFEAALVM LPDHAPDRWE RVAARLPGRT PQEAWEHYQA  60
LVADVDLIER GAVDTPDCWD DDDDGRATVA SRGRPAGKPR GEERRRGIPW SEEEHKLFLD  120
GLEKYGRGDW RNISRFAVRS RTPTQVASHA QKYFIRQANA ATRDSKRKSI HDITTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-48MYB_related family protein