PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG058610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 104aa MW: 11803.5 Da PI: 9.7255 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 93.4 | 1.8e-29 | 1 | 53 | 3 | 56 |
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 r++WtpeLH+rFveave+L G++ A+Pk+i++lm+v+gLt+e+v+SHLQkYRl+ TRIDC3BG058610.1 1 RMVWTPELHHRFVEAVEHL-GEKGAVPKAIVRLMNVDGLTRENVASHLQKYRLY 53 89*****************.9*******************************85 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.1e-16 | 1 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e++ ++v+av+ lG + +k+I r m+ g+t++++ s++qky+ TRIDC3BG058610.1 1 RMVWTPELHHRFVEAVEHLGEKgaVPKAIVRLMNvDGLTRENVASHLQKYR 51 789***********************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 104 aa Download sequence |
RMVWTPELHH RFVEAVEHLG EKGAVPKAIV RLMNVDGLTR ENVASHLQKY RLYLKRSSPG 60 AAAPSPPPPP FFPRFDVQRP HQDSANRSGY CAYPYVSYQK LGCD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G05090.1 | 1e-27 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG058610.1 |