PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG058440.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 803aa    MW: 88653.5 Da    PI: 5.709
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG058440.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.63.2e-1154297982374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cA+ vs +d + a+ lL++++++as +gd  qRla++f+++L+arla+++s++yk  + s+ +    ++ l+a++l+  ++P+ k+s
  TRIDC3BG058440.1 429 ETLLIHCAQSVSIDDRRSATDLLKQIRQHASANGDGDQRLAHCFANGLEARLAGNGSQIYKLHTISRFA---CADILKAYQLYLAACPFKKIS 518
                       789**********************************************************99999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h  aNq+I++ave++++vHi+Df++ +G+QWp+L+q L++Rp+gpp+lRiT+++ p++g   +e++ee+g+ L+++A++++vpf+++  +a++
  TRIDC3BG058440.1 519 HYFANQTIMNAVEKAKKVHIVDFGVYYGFQWPCLIQRLSKRPGGPPELRITAIDTPQPGfrPAERIEEIGRYLSDYAQTFKVPFKYHG-IASQ 610
                       ****************************************************************************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e++++e+L ++++E l+Vn++++ ++l+desv  es+r+ vL+++++++P+v+++   + ++n++ F+ rf eal  +sa fd+lea++pr+
  TRIDC3BG058440.1 611 FEAVRVEDLPIEKDEILIVNSMFRFKTLMDESVVAESPRNMVLNTIRKMKPHVFIHGVTNGSYNAPFFVSRFREALFQFSAHFDMLEANIPRD 703
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       +eer  +E  +++re+ nv++ceg er er et+++W+ r ++aGFk++pl+++++k a+  ++ ++++ + ++e++g+l++gWk+r L+++S
  TRIDC3BG058440.1 704 NEERLLIESTIFSREAINVISCEGMERMERPETYKQWQVRNQRAGFKQLPLDQEIMKRAREKVKCYHKN-FIIDEDNGWLLQGWKGRILYALS 795
                       ****************************************************************99966.*********************** PP

              GRAS 372 aWr 374
                        W+
  TRIDC3BG058440.1 796 TWK 798
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 803 aa     Download sequence    
MVMDAALHDW CGPLPGGSKL PIYPQIPDGF TAEELESLLL FPPDGADAGA YLNAAAAPPL  60
LPSPPASADS ASSPPPRDAL VSSPAAAAAG QAQPDDSEVF SDIVLGYINR MLMAEDIDEK  120
FDHYPAHQAL LAAEKPFLEI LADQPPCSGG STVESPDGSS VTTNSFNSLA TCNCAAPSGG  180
LRAMQAPPAL EFPTAEFLQP PQFYQDLSPE SCVVEAGGAW PYDAMEFNPL PDALLSQSSS  240
FASSNGSSVA FSEGFEPWLS TAGAVPDAGL SDFVLQSQQA AQFSRGFEEG SRFLPQESKL  300
VIDVDSLPSV WVKEDKKVVE VKREKADAEV AIHRGKKHFY GDDLDADEVR CCKHSAPVVD  360
ADHLVREMMD KVLLCNGETC SRGVKELREA LQHDVAAHSG GAHGKGSGHG KGRGKKQVKQ  420
PKKEVVDLET LLIHCAQSVS IDDRRSATDL LKQIRQHASA NGDGDQRLAH CFANGLEARL  480
AGNGSQIYKL HTISRFACAD ILKAYQLYLA ACPFKKISHY FANQTIMNAV EKAKKVHIVD  540
FGVYYGFQWP CLIQRLSKRP GGPPELRITA IDTPQPGFRP AERIEEIGRY LSDYAQTFKV  600
PFKYHGIASQ FEAVRVEDLP IEKDEILIVN SMFRFKTLMD ESVVAESPRN MVLNTIRKMK  660
PHVFIHGVTN GSYNAPFFVS RFREALFQFS AHFDMLEANI PRDNEERLLI ESTIFSREAI  720
NVISCEGMER MERPETYKQW QVRNQRAGFK QLPLDQEIMK RAREKVKCYH KNFIIDEDNG  780
WLLQGWKGRI LYALSTWKAN PQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-165GRAS family protein