PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG057870.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 162aa MW: 17136.5 Da PI: 9.329

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG057870.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00085	39	61	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H TRIDC3BG057870.2 39 FECKTCNRQFPTFQALGGHRASH 61 89**********99999998887 PP
2	zf-C2H2	11.9	0.00068	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cg F L H+r+H TRIDC3BG057870.2 82 HECPVCGLEFAVGQALGGHMRRH 104 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
LGGLDTARLL MLLAQQHQQH QHQRAVAGAA QAMGGGRVFE CKTCNRQFPT FQALGGHRAS 60 HKRPRLQQHP QKPHAPAKPR AHECPVCGLE FAVGQALGGH MRRHRVEAEA ATNAPSGKAA 120 EPEMVVASCD AGGICLDLNL TPSENCTKCR SAAGLSAAAR QG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	1e-31	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG057870.2