PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG056310.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 407aa    MW: 44054.6 Da    PI: 7.991
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG056310.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.41.2e-3265121259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve+s  +++++ei+Y+g+Hnh 
  TRIDC3BG056310.2  65 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVETSL-EGQITEIVYKGTHNHA 121
                       8****************************************.***************7 PP
2WRKY105.52.8e-33228286159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+
  TRIDC3BG056310.2 228 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDLRAVITTYEGKHNHD 286
                       59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
STNGGEEAYT GQQQQAWGYG QQQEGMNASA ANPASFSAPA LQATSSEMAP AGAYRQTHSQ  60
RRSSDDGYNW RKYGQKQVKG SENPRSYYKC TFPNCPTKKK VETSLEGQIT EIVYKGTHNH  120
AKPLNTRRGS GGGAAAAQVL QSGGDASENS FGAMVTTPEN SSASFGDDEN GVSSPRSGNV  180
GRNDNDDDEP DSKRRRDGGD GEGINMAGNR TVREPRVVVQ TMSDIDILDD GYRWRKYGQK  240
VVKGNPNPRS YYKCTTVGCP VRKHVERASH DLRAVITTYE GKHNHDVPAA RGSAALYRPA  300
PRAADSTAST GHYLNPQPSA MAYQASAAPA VTGTQQYAPR PDGFGGQNQG SFGFNGNFGF  360
SGPGFDNPTA SYMSQHQQQQ RQNDAMHASS AKEEPREEDM FFQNSQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.12e-98WRKY family protein