PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG056310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 560aa MW: 59736.9 Da PI: 6.6824 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.8 | 2e-32 | 218 | 274 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkve+s +++++ei+Y+g+Hnh TRIDC3BG056310.1 218 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVETSL-EGQITEIVYKGTHNHA 274 8****************************************.***************7 PP | |||||||
2 | WRKY | 104.9 | 4.3e-33 | 381 | 439 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ TRIDC3BG056310.1 381 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDLRAVITTYEGKHNHD 439 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MTTSSSGSVE TSANSRPGSF SFGSASFTEM LGGSAAAGGA SGYKALTPPS LPLSPSLMSP 60 SSFFNMPAGM NLADFLDSPV LLTSSIFPSP TTGAFGSQFN WRPEAPMPSA AEQGGKEEQR 120 QPYSDFSFQT APANSEEAAR ATTTTTSLQP PVAVASQGEE AYTGQQQQAW GYGQQQEGMN 180 ASAANPASFS APALQATSSE MAPAGAYRQT HSQRRSSDDG YNWRKYGQKQ VKGSENPRSY 240 YKCTFPNCPT KKKVETSLEG QITEIVYKGT HNHAKPLNTR RGSGGGAAAA QVLQSGGDAS 300 ENSFGAMVTT PENSSASFGD DENGVSSPRS GNVGRNDNDD DEPDSKRRRD GGDGEGINMA 360 GNRTVREPRV VVQTMSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTV GCPVRKHVER 420 ASHDLRAVIT TYEGKHNHDV PAARGSAALY RPAPRAADST ASTGHYLNPQ PSAMAYQASA 480 APAVTGTQQY APRPDGFGGQ NQGSFGFNGN FGFSGPGFDN PTASYMSQHQ QQQRQNDAMH 540 ASSAKEEPRE EDMFFQNSQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-97 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG056310.1 |