PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG052920.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 350aa    MW: 37596.8 Da    PI: 6.1146
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG052920.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.4e-05232276554
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++ + + R +++ +++  L++l+ +      +K + a++L +A eYIk L
  TRIDC3BG052920.2 232 NSLMAKVRKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 276
                       56677899999*************98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MADEWWSGSQ RSHGTSACSA APLMDTGHAA TCGWTSPAAE STSSITFQDP HRSSSTITHP  60
PSSDAASSLG DVHMDWTHAF LSGRSDASFQ AVLQDDMLAS MTTRPLFRPH QPAVDEAVMS  120
NPFRDMSHSF SLLDQVPAAS SPYGTAPLQG MFDTTGASHN VSVLGECQSS TSYDGTAGMQ  180
LNQAATQMLG GGAQLQYLSG SGSYMPFGGA PLSSQLLLQA LQPKTSYSSS SNSLMAKVRK  240
EKLGDRITAL QQLVSPFGKT DTASVLHEAN EYIKFLHDQV ASLTYPYLKN VNPLQQFQQK  300
RSENAKDDGG EPKKDLRSRG LCLVPVATTY TVASETVPEF WYPTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.14e-39bHLH family protein