PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG052920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 361aa    MW: 38876.4 Da    PI: 6.6746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG052920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.00032502871254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +A eYIk L
  TRIDC3BG052920.1 250 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 287
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
ATCGWTSPAA ESTSSITFQD PHRSSSTITH PPSSDAASSL GDVHMDWTHA FLSGRSDASF  60
QAVLQDDMLA SMTTRPLFRP HQPAVDEAVM SNPFRDMSHS FSLLDQVPAA SSPYGTAPLQ  120
GMFDTTGASH NVSVLGECQS STSYDGTAGM QLNQAATQML GGGAQLQYLS GSGSYMPFGG  180
APLSSQLLLQ ALQPKTSYSS SSNSLMAKFL LQSAEHACSP PARRSEPDSP AAAKRPRIEA  240
PSPLPTFKVR KEKLGDRITA LQQLVSPFGK TDTASVLHEA NEYIKFLHDQ VASLTYPYLK  300
NVNPLQQFQQ KRSENAKDDG GEPKKDLRSR GLCLVPVATT YTVASETVPE FWYPTFGGTF  360
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.33e-46bHLH family protein