PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG052480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 138aa MW: 15695.1 Da PI: 9.5875 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 41.9 | 3.3e-13 | 36 | 115 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn Y+ e+GF vr ks+ + + + +++ vC ++g +++++++ + + C a +++ ++kd+ w+++++ + HnH+l+ TRIDC3BG052480.1 36 DYYNLYSWEIGFGVRYGKSRLNVERT-KCMQEIVCGCSGISKKSNTR---------TCWCRCPALIRLLRSKDNGWYISEFISSHNHSLM 115 69****************99995544.67899*******99886555.........889*****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MSALEKALRR YAEKKKDTVI VPAVGSTSHS LGEAYDYYNL YSWEIGFGVR YGKSRLNVER 60 TKCMQEIVCG CSGISKKSNT RTCWCRCPAL IRLLRSKDNG WYISEFISSH NHSLMEKCGG 120 KVYSSCSQVN KKNDVFKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 3e-12 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG052480.1 |