PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG046930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 272aa    MW: 29839.7 Da    PI: 7.9079
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG046930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind994.4e-31501422103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k++++++d++++ ++ w   +n+f+vld+  f++ +Lp+yFkh+nfaSFvRQLn+YgF+kv+ +          weF+h+sF +g+ +ll
  TRIDC3BG046930.2  50 FVAKTFHMVSDPATDAVVCWGGASNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDV---------WEFAHESFLRGQAKLL 133
                       9********************999****************************************9877.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                         i rkk++
  TRIDC3BG046930.2 134 PLIVRKKKR 142
                       *****9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
EGVTPHREQQ AHTEQSRNSE RLPYPVVDSS SMGSECKGHQ PQDDGGVAPF VAKTFHMVSD  60
PATDAVVCWG GASNTFLVLD PAAFSDFLLP SYFKHRNFAS FVRQLNTYGF RKVDPDVWEF  120
AHESFLRGQA KLLPLIVRKK KRAGAGAAGR ELCVEEEEVR GTIQAVQRLR DERRGMEEEL  180
QAMDRRLCAS ENRPGQMMAF LGKLADNPGV VLRAMVAKKE ELAAAGAGGK DSSPDKRRRI  240
GADAGRGADA ADQAAQSRAV PFPFCNLGQV FY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236240KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.18e-56HSF family protein