PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG044630.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 24628.8 Da PI: 9.1874 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.9e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEdell +v+ +G +W + +++ g++R++k+c++rw++yl TRIDC3BG044630.3 14 RGPWSPEEDELLRSYVRSHGAVgNWIALPQKAGLNRCGKSCRLRWLNYL 62 89******************879************************97 PP | |||||||
2 | Myb_DNA-binding | 34.9 | 3.5e-11 | 71 | 111 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T++Ed + + + G++ W+ Ia++++ gRt++++k++w++ TRIDC3BG044630.3 71 YTEQEDMVICSLYNSIGSR-WSIIASKLP-GRTDNDVKNYWNT 111 69*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MGRAPCCDKA SVKRGPWSPE EDELLRSYVR SHGAVGNWIA LPQKAGLNRC GKSCRLRWLN 60 YLRPDIKHGG YTEQEDMVIC SLYNSIGSRW SIIASKLPGR TDNDVKNYWN TKLKKKAMAM 120 HQHQQQQYHH HGSAGRGHTG GATIATPPPA PQSQCASYMQ PSPASASSAV TTASGDAASF 180 GAMYSPSHQA PLAHYNVNAA APLAEFSAMP MPAAANSWAI NMAFEDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 1e-68 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG044630.3 |