PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG042140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 371aa MW: 38474.7 Da PI: 7.9205

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG042140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.4	1.9e-06	264	304	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+r+ +++ L++l+P K++ a++L +A Y+k L TRIDC3BG042140.1 264 ARLRRERVSDRLRVLQKLVPGG-----SKMDTASMLDEAASYLKFL 304 599***************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
GLHDDAYLPR PVNQLSCGRF DLDDAFLRLL QCDFGGGGQV SSSYGAAVGG AAANNGALGF 60 FGSEVDVFSS VVDGASAHYG LLDSALAFSR VLPCGGEGDP GAVSNGAMFS GYSGTTVCNI 120 SSGESNNYSS GGGGHDVTEV ASPTSTISPT TTSHPTITSS AQQALHANRK LPADDCAAPL 180 PHAGTKRKAP TTTATSITFG QDTNAGAAGE YKPDMEAMAQ VKEMIYRAAA MRPVNLVTEP 240 TAAGSIKPQR KNVRISSDPQ TVAARLRRER VSDRLRVLQK LVPGGSKMDT ASMLDEAASY 300 LKFLKSQVQA LETLGTTSST GASAAAVAST GRLHSQQHYY SNNPGFLGFA RNNNNISSVF 360 RNPNGNSARL L

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

GLHDDAYLPR PVNQLSCGRF DLDDAFLRLL QCDFGGGGQV SSSYGAAVGG AAANNGALGF  60
FGSEVDVFSS VVDGASAHYG LLDSALAFSR VLPCGGEGDP GAVSNGAMFS GYSGTTVCNI  120
SSGESNNYSS GGGGHDVTEV ASPTSTISPT TTSHPTITSS AQQALHANRK LPADDCAAPL  180
PHAGTKRKAP TTTATSITFG QDTNAGAAGE YKPDMEAMAQ VKEMIYRAAA MRPVNLVTEP  240
TAAGSIKPQR KNVRISSDPQ TVAARLRRER VSDRLRVLQK LVPGGSKMDT ASMLDEAASY  300
LKFLKSQVQA LETLGTTSST GASAAAVAST GRLHSQQHYY SNNPGFLGFA RNNNNISSVF  360
RNPNGNSARL L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	270	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	7e-34	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG042140.1