PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG042130.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 289aa    MW: 31845.3 Da    PI: 9.587
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG042130.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.36.2e-12556147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                       +++WT eE+e l ++v ++G g W+tI +          R+  ++k++w+++
  TRIDC3BG042130.11  5 KQKWTSEEEEALRRGVLKHGAGKWRTIQKDPEfspvlSSRSNIDLKDKWRNL 56
                       79***********************************9************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGAPKQKWTS EEEEALRRGV LKHGAGKWRT IQKDPEFSPV LSSRSNIDLK DKWRNLSFSA  60
SGLGSRDKQR VPRPKAPSSS PSPSPQLLLL PATNNVAEAS PPEDCEKSPQ DDKTPSPKFS  120
MILEALGELK EPNGSEVTTI CNFIEQRHEV QPNFRRLLCA KLRRLIGVNK VEKIDKSYKL  180
TDSYAKRALA PMKDPSLKKK DSAKSSKAAK GQGLFTAASP ALGAAEAAAT KVADAEAKSH  240
LANEHMMEVE RIGKMAEETE SLLELASELY ERCSRGEVLT ILQVAHREF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.19e-47MYB_related family protein