PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG041570.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 360aa    MW: 41334.9 Da    PI: 10.1133
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG041570.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.41.3e-1931116191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY++YAk+ GF v ++++++  ++ + +  t+ C+++gk++ ++k+   + +++++tr++C ak++ ++  ++k+++t++ l+HnH+++p
  TRIDC3BG041570.3  31 NFYKDYAKKEGFGVIRRTTRHG-EDSKLVYFTLACNRQGKAQYSSKN---SFKPNPSTRMQCPAKINFSRC-EEKFCITSITLDHNHPISP 116
                       6***************999998.6666999*************9999...999******************.9**************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
RDSSDDQQVE QIMMLQPKKG MTFDSEDAAV NFYKDYAKKE GFGVIRRTTR HGEDSKLVYF  60
TLACNRQGKA QYSSKNSFKP NPSTRMQCPA KINFSRCEEK FCITSITLDH NHPISPSKAR  120
FLRCHKKLDL HAKRRLELND QAGIRLNKIF GSLVMEAGGY GNLEFGEKEC RNYLQETRRL  180
KLGAGDAHAV YQYFLRMQSK DPDFFHLMDV DKDGRLRNVF WADARKVDAY RASHAVQVQA  240
EDPTSKHEDT MLNKEKLVLS PIPVRSAGRP RSKRKISKVD QVIQKLRAKK RQVPTSTTEV  300
QTHKGRKQNY VSKSKSGLQS SKQTEGNIQY EGYGAGSTWF FLNEFQELQT DEHATPTHII
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1269279RPRSKRKISKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-29FAR1 family protein