PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG041570.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 273aa    MW: 31755.2 Da    PI: 8.5589
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG041570.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.17.8e-2076161191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY++YAk+ GF v ++++++  ++ + +  t+ C+++gk++ ++k+   + +++++tr++C ak++ ++  ++k+++t++ l+HnH+++p
  TRIDC3BG041570.2  76 NFYKDYAKKEGFGVIRRTTRHG-EDSKLVYFTLACNRQGKAQYSSKN---SFKPNPSTRMQCPAKINFSRC-EEKFCITSITLDHNHPISP 161
                       6***************999998.6666999*************9999...999******************.9**************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
SHNIFDLFVG SFKFVMEPNL IFGEVVDKNR AFEDADEDAF IFEEIRDSSD DQQVEQIMML  60
QPKKGMTFDS EDAAVNFYKD YAKKEGFGVI RRTTRHGEDS KLVYFTLACN RQGKAQYSSK  120
NSFKPNPSTR MQCPAKINFS RCEEKFCITS ITLDHNHPIS PSKARFLRCH KKLDLHAKRR  180
LELNDQAGIR LNKIFGSLVM EAGGYGNLEF GEKECRNYLQ ETRRLKLGAG DAHAVYQYFL  240
RMQSKDPDFF HLMDVDKVQA VLVQRERYLK WIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-21FAR1 family protein