PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG041070.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1374aa MW: 154462 Da PI: 6.109

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG041070.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	15	69	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql++Le+ + ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k TRIDC3BG041070.5 15 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 69 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1374 aa Download sequence
GGAAGPSGSG EKPVKRMMKT PYQLDVLEQT YLAEQYPSEA MRAELSVKIG LSDRQLQMWF 60 CHRRLKDRKP PAKRQRRDEE GPATPVPVPP QVLPIQAMLL GSTDIMMSAG SPYDEPLLPP 120 THSRRGAGRS SAVPRISAPD IGRRYYEPLS VMLPPPVAPM QFRQAELRVI TSVESQLGEP 180 LREDGPVLGV DFDPLPPGAF GAPIVPEQQK QPVRSYDAKI FSRHDPNLLK VSSFLPSMEH 240 PFVPNSFAGK RKSMVGNPPP QVHPHGGSRA VHEYQFLPEQ PSDTYERASR SHYYDTPVEA 300 SNSRIPSLTP GPHLLHVSEE MTPGYAFEGQ GLLPQSGRPQ VFSAVSTDYE MNQSNSNINS 360 VPVDGQFGSS HVAGFEDPLI SSETRAYHDE DASRVDRKRK HNEEAKIAKE VEAHEKRIRK 420 ELEKQDIMRR KREEQMRKEM ERHDRERRKE EERLLRERQR EEERFQREQR REHERMEKFL 480 QKQSRRAEKQ RQKEELRKEK EMARQKAANE RATARRIARE YMELVEDERL ELMELAAQSK 540 GLPSMLCLDS DTLQQLDSFR GMLSHFPPEM VRLKAPLSIK PWTGSEESVG KLLMVWKFLI 600 TFADVLELSS VTLDEFIQSL HDYDSRLLGE LHVALLKSII KDIEDVARTP SVALGVNPGG 660 GHPQIVEGAY SWGFNIRNWQ RHLNLLTWPE ILRQFALSAG FGPQLKKRNA EDVFYRDENE 720 GQDGQNVISA LRNGSAAVRA AALMKERGYT HRRSRHRLTP GTVKFAAFHV LSLEDSSGLT 780 ILEVAEKIQK SGLRDLTTSK TPEASIAAAL SRDTKLFERT APSTYCVKSP YRKDPADSEA 840 VLSAAREKIR AFQNVLSDSE AEKEVDDVDR DEESDCDDDP DGDDVNIEVG DEKGPLLAVK 900 AQGVIPTATK VGDVKGDPDD LDAALTQPIS STTSRKDIAM LSLGDSSAVG TSSVSPLRAS 960 SDHPEVITGD PEDTQIDESN QGESWVQGLA EGDYCDLSVE ERLNALVALV GVATEGNSIR 1020 AVLEERLEAA NAIKKQMWAE AQLDKRRSKE EFASKVQYNS YTSLKADVIP ENNATETTPT 1080 PVRNLDIDND ENAGTSNNNE ILNQQNNAGI VSYERNGTGQ ETSATPDNLS AQQYAYADKT 1140 RSQLKSYIGH RAEQLYVYRL LPLGQDRRRN RYWQFSTSTS PNDPGSGRIF FESREGYWRV 1200 IDSEEVFDAL VASLDTRGSR EAQLHSMLQR VESTFKEGIK RKRDAAIEQS AGRYLKNGAT 1260 DTMRASYRSE FGSPSSTHSS VSADSATTYS DSFKIELGRN DVEKISISKR ADGFLKWMWS 1320 ECCDRQLTCA MKYGKKRCSA LMHSCNYCYQ IYLAEERLFC SNWNEIAQVA VSYH

Sequence ? help Back to Top

Protein Sequence Length: 1374 aa Download sequence

GGAAGPSGSG EKPVKRMMKT PYQLDVLEQT YLAEQYPSEA MRAELSVKIG LSDRQLQMWF  60
CHRRLKDRKP PAKRQRRDEE GPATPVPVPP QVLPIQAMLL GSTDIMMSAG SPYDEPLLPP  120
THSRRGAGRS SAVPRISAPD IGRRYYEPLS VMLPPPVAPM QFRQAELRVI TSVESQLGEP  180
LREDGPVLGV DFDPLPPGAF GAPIVPEQQK QPVRSYDAKI FSRHDPNLLK VSSFLPSMEH  240
PFVPNSFAGK RKSMVGNPPP QVHPHGGSRA VHEYQFLPEQ PSDTYERASR SHYYDTPVEA  300
SNSRIPSLTP GPHLLHVSEE MTPGYAFEGQ GLLPQSGRPQ VFSAVSTDYE MNQSNSNINS  360
VPVDGQFGSS HVAGFEDPLI SSETRAYHDE DASRVDRKRK HNEEAKIAKE VEAHEKRIRK  420
ELEKQDIMRR KREEQMRKEM ERHDRERRKE EERLLRERQR EEERFQREQR REHERMEKFL  480
QKQSRRAEKQ RQKEELRKEK EMARQKAANE RATARRIARE YMELVEDERL ELMELAAQSK  540
GLPSMLCLDS DTLQQLDSFR GMLSHFPPEM VRLKAPLSIK PWTGSEESVG KLLMVWKFLI  600
TFADVLELSS VTLDEFIQSL HDYDSRLLGE LHVALLKSII KDIEDVARTP SVALGVNPGG  660
GHPQIVEGAY SWGFNIRNWQ RHLNLLTWPE ILRQFALSAG FGPQLKKRNA EDVFYRDENE  720
GQDGQNVISA LRNGSAAVRA AALMKERGYT HRRSRHRLTP GTVKFAAFHV LSLEDSSGLT  780
ILEVAEKIQK SGLRDLTTSK TPEASIAAAL SRDTKLFERT APSTYCVKSP YRKDPADSEA  840
VLSAAREKIR AFQNVLSDSE AEKEVDDVDR DEESDCDDDP DGDDVNIEVG DEKGPLLAVK  900
AQGVIPTATK VGDVKGDPDD LDAALTQPIS STTSRKDIAM LSLGDSSAVG TSSVSPLRAS  960
SDHPEVITGD PEDTQIDESN QGESWVQGLA EGDYCDLSVE ERLNALVALV GVATEGNSIR  1020
AVLEERLEAA NAIKKQMWAE AQLDKRRSKE EFASKVQYNS YTSLKADVIP ENNATETTPT  1080
PVRNLDIDND ENAGTSNNNE ILNQQNNAGI VSYERNGTGQ ETSATPDNLS AQQYAYADKT  1140
RSQLKSYIGH RAEQLYVYRL LPLGQDRRRN RYWQFSTSTS PNDPGSGRIF FESREGYWRV  1200
IDSEEVFDAL VASLDTRGSR EAQLHSMLQR VESTFKEGIK RKRDAAIEQS AGRYLKNGAT  1260
DTMRASYRSE FGSPSSTHSS VSADSATTYS DSFKIELGRN DVEKISISKR ADGFLKWMWS  1320
ECCDRQLTCA MKYGKKRCSA LMHSCNYCYQ IYLAEERLFC SNWNEIAQVA VSYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG041070.5