PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG041070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1808aa MW: 201760 Da PI: 5.1935

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG041070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	50	104	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql++Le+ + ++yps+++r+eL+ k+gL++rq ++WF+ rR k++k TRIDC3BG041070.2 50 KRMMKTPYQLDVLEQTYLAEQYPSEAMRAELSVKIGLSDRQLQMWFCHRRLKDRK 104 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1808 aa Download sequence
MDAAGAGDGP PREAPEERTP QTPAPPAVAA PASASGGAAG PSGSGEKPVK RMMKTPYQLD 60 VLEQTYLAEQ YPSEAMRAEL SVKIGLSDRQ LQMWFCHRRL KDRKPPAKRQ RRDEEGPATP 120 VPVPPQVLPI QAMLLGSTDI MMSAGSPYDE PLLPPTHSRR GAGRSSAVPR ISAPDIGRRY 180 YEPLSVMLPP PVAPMQFRQA ELRVITSVES QLGEPLREDG PVLGVDFDPL PPGAFGAPIV 240 PEQQKQPVRS YDAKIFSRHD PNLLKVSSFL PSMEHPFVPN SFAGKRKSMV GNPPPQVHPH 300 GGSRAVHEYQ FLPEQPSDTY ERASRSHYYD TPVEASNSRI PSLTPGPHLL HVSEEMTPGY 360 AFEGQGLLPQ SGRPQVFSAV STDYEMNQSN SNINSVPVDG QFGSSHVAGF EDPLISSETR 420 AYHDEDASRV DRKRKHNEEA KIAKEVEAHE KRIRKELEKQ DIMRRKREEQ MRKEMERHDR 480 ERRKEEERLL RERQREEERF QREQRREHER MEKFLQKQSR RAEKQRQKEE LRKEKEMARQ 540 KAANERATAR RIARDHFPPE MVRLKAPLSI KPWTGSEESV GKLLMVNVWK FLITFADVLE 600 LSSVTLDEFI QSLHDYDSRL LGELHVALLK SIIKDIEDVA RTPSVALGVN PGGGHPQIVE 660 GAYSWGFNIR NWQRHLNLLT WPEILRQFAL SAGFGPQLKK RNAEDVFYRD ENEGQDGQNV 720 ISALRNGSAA VRAAALMKER GYTHRRSRHR LTPGTVKFAA FHVLSLEDSS GLTILEVAEK 780 IQKSGLRDLT TSKTPEASIA AALSRDTKLF ERTAPSTYCV KSPYRKDPAD SEAVLSAARE 840 KIRAFQNVLS DSEAEKEVDD VDRDEESDCD DDPDGDDVNI EVGDEKGPLL AVKAQGVIPT 900 ATKVGDVKGD PDDLDAALTQ PISSTTSRKD IAMLSLGDSS AVGTSSVSPL RASSDHPEVI 960 TGDPEDTQID ESNQGESWVQ GLAEGDYCDL SVEERLNALV ALVGVATEGN SIRAVLEERL 1020 EAANAIKKQM WAEAQLDKRR SKEEFASKVQ YNSYTSLKAD VIPENNATET TPTPVRNLDI 1080 DNDENAGTSN NNEILNQQNN AGIVSYERNG TGQETSATPD NLSAQQYAYA DKTRSQLKSY 1140 IGHRAEQLYV YRLLPLGQDR RRNRYWQFST STSPNDPGSG RIFFESREGY WRVIDSEEVF 1200 DALVASLDTR GSREAQLHSM LQRVESTFKE GIKRKRDAAI EQSAGRYLKN GATDTMRASY 1260 RSEFGSPSST HSSVSADSAT TYSDSFKIEL GRNDVEKISI SKRADGFLKW MWSECCDRQL 1320 TCAMKYGKKR CSALMHSCNY CYQIYLAEER HCSSCHKTFK SIYNYSEHTS QCDEKRRTDP 1380 NWKMQIADYS VPIGMRLLKL QLATIEASIP SEALQPFWSD GYRKSWGVKL HSTTSIEEIF 1440 QMLTLLEGAI RRDYLSSDFE TSNELLNNSK TEDMPSQNPS SLPGTSVLPW VPDTTAAITL 1500 RMLDLDYAVS YVQNQKKERD GGDSMKLASR YTVVKKAQDL EPLEPTGFDL YDARGSPSSG 1560 RRGRGRGSRG GSRGGRGRSR GGRIPRGISS SSRIEFMDED AAYEKAPRKN ARRGRGRGRG 1620 RGRGRRTVRP RQPSSEGRGR SIPKANLLGS FSMLSNVKPS AVEESPRSSG AEEWGLESRR 1680 PYIQGDGDEN SSESESDQSE DNGENGQPMD EEYEEQVPDY SRAYSGGLRP HAHVMMDDET 1740 EDDDEDAEGD GEGDEEEYDV NHASADVDDE MDEDDDDIGN DGDDGGDGVE VNADEDEGAT 1800 SYSSEYSE

Sequence ? help Back to Top

Protein Sequence Length: 1808 aa Download sequence

MDAAGAGDGP PREAPEERTP QTPAPPAVAA PASASGGAAG PSGSGEKPVK RMMKTPYQLD  60
VLEQTYLAEQ YPSEAMRAEL SVKIGLSDRQ LQMWFCHRRL KDRKPPAKRQ RRDEEGPATP  120
VPVPPQVLPI QAMLLGSTDI MMSAGSPYDE PLLPPTHSRR GAGRSSAVPR ISAPDIGRRY  180
YEPLSVMLPP PVAPMQFRQA ELRVITSVES QLGEPLREDG PVLGVDFDPL PPGAFGAPIV  240
PEQQKQPVRS YDAKIFSRHD PNLLKVSSFL PSMEHPFVPN SFAGKRKSMV GNPPPQVHPH  300
GGSRAVHEYQ FLPEQPSDTY ERASRSHYYD TPVEASNSRI PSLTPGPHLL HVSEEMTPGY  360
AFEGQGLLPQ SGRPQVFSAV STDYEMNQSN SNINSVPVDG QFGSSHVAGF EDPLISSETR  420
AYHDEDASRV DRKRKHNEEA KIAKEVEAHE KRIRKELEKQ DIMRRKREEQ MRKEMERHDR  480
ERRKEEERLL RERQREEERF QREQRREHER MEKFLQKQSR RAEKQRQKEE LRKEKEMARQ  540
KAANERATAR RIARDHFPPE MVRLKAPLSI KPWTGSEESV GKLLMVNVWK FLITFADVLE  600
LSSVTLDEFI QSLHDYDSRL LGELHVALLK SIIKDIEDVA RTPSVALGVN PGGGHPQIVE  660
GAYSWGFNIR NWQRHLNLLT WPEILRQFAL SAGFGPQLKK RNAEDVFYRD ENEGQDGQNV  720
ISALRNGSAA VRAAALMKER GYTHRRSRHR LTPGTVKFAA FHVLSLEDSS GLTILEVAEK  780
IQKSGLRDLT TSKTPEASIA AALSRDTKLF ERTAPSTYCV KSPYRKDPAD SEAVLSAARE  840
KIRAFQNVLS DSEAEKEVDD VDRDEESDCD DDPDGDDVNI EVGDEKGPLL AVKAQGVIPT  900
ATKVGDVKGD PDDLDAALTQ PISSTTSRKD IAMLSLGDSS AVGTSSVSPL RASSDHPEVI  960
TGDPEDTQID ESNQGESWVQ GLAEGDYCDL SVEERLNALV ALVGVATEGN SIRAVLEERL  1020
EAANAIKKQM WAEAQLDKRR SKEEFASKVQ YNSYTSLKAD VIPENNATET TPTPVRNLDI  1080
DNDENAGTSN NNEILNQQNN AGIVSYERNG TGQETSATPD NLSAQQYAYA DKTRSQLKSY  1140
IGHRAEQLYV YRLLPLGQDR RRNRYWQFST STSPNDPGSG RIFFESREGY WRVIDSEEVF  1200
DALVASLDTR GSREAQLHSM LQRVESTFKE GIKRKRDAAI EQSAGRYLKN GATDTMRASY  1260
RSEFGSPSST HSSVSADSAT TYSDSFKIEL GRNDVEKISI SKRADGFLKW MWSECCDRQL  1320
TCAMKYGKKR CSALMHSCNY CYQIYLAEER HCSSCHKTFK SIYNYSEHTS QCDEKRRTDP  1380
NWKMQIADYS VPIGMRLLKL QLATIEASIP SEALQPFWSD GYRKSWGVKL HSTTSIEEIF  1440
QMLTLLEGAI RRDYLSSDFE TSNELLNNSK TEDMPSQNPS SLPGTSVLPW VPDTTAAITL  1500
RMLDLDYAVS YVQNQKKERD GGDSMKLASR YTVVKKAQDL EPLEPTGFDL YDARGSPSSG  1560
RRGRGRGSRG GSRGGRGRSR GGRIPRGISS SSRIEFMDED AAYEKAPRKN ARRGRGRGRG  1620
RGRGRRTVRP RQPSSEGRGR SIPKANLLGS FSMLSNVKPS AVEESPRSSG AEEWGLESRR  1680
PYIQGDGDEN SSESESDQSE DNGENGQPMD EEYEEQVPDY SRAYSGGLRP HAHVMMDDET  1740
EDDDEDAEGD GEGDEEEYDV NHASADVDDE MDEDDDDIGN DGDDGGDGVE VNADEDEGAT  1800
SYSSEYSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1613	1622	RGRGRGRGRG
2	1613	1623	RGRGRGRGRGR
3	1615	1624	RGRGRGRGRG
4	1615	1625	RGRGRGRGRGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG041070.2