PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG037320.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 130aa MW: 14943 Da PI: 8.0438

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG037320.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	46.8	6e-15	6	43	5	42
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +C+C+k++Cl++YC Cf+a ++C+e C+C++C+N+e++ TRIDC3BG037320.5 6 HCTCEKTQCLQRYCHCFEAWVFCDEGCSCQGCRNTEDN 43 8*********************************9975 PP
2	TCR	32.8	1.4e-10	84	107	2	25
TCR 2 ekkgCnCkkskClkkYCeCfaagk 25 + kgCnC++s+C+k+YCeCf++++ TRIDC3BG037320.5 84 HVKGCNCRNSECKKLYCECFKRRV 107 689*****************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence
MDDLPHCTCE KTQCLQRYCH CFEAWVFCDE GCSCQGCRNT EDNSDEVDER AECIMKKKPD 60 AFKPKIIAGD GPGLQQQQQA AGVHVKGCNC RNSECKKLYC ECFKRRVQRQ VPVHRVRQHL 120 RSERRGSTST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04850.1	4e-20	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG037320.5