PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG036350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 227aa MW: 25274.4 Da PI: 8.8557 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70 | 5.6e-22 | 45 | 168 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................................tekerrtraet 58 Y++Y++++GFs++ ++s++s+ ++ k+tf+C+k+g+++ ++++ +k+rr++ + TRIDC3BG036350.1 45 HYKAYSRRIGFSMKANTSRRSSYTNVLEKQTFCCNKSGRPKINDDAptpvferlssdsdgcgdgqdvgskkagcssykspggLVKKRRREFIK 137 5******************************************999************************************99********* PP FAR1 59 rtgCkaklkvkkekdgkwevtkleleHnHela 90 +tgC+ak++vk++ ++kw+vt ++ +HnH l TRIDC3BG036350.1 138 QTGCRAKMTVKLT-NNKWVVTGVVADHNHRLI 168 *************.9**************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MPSNGGQGRT GSAALLGFDE NEVRSSPQEP YVGMEFDTVE GAKAHYKAYS RRIGFSMKAN 60 TSRRSSYTNV LEKQTFCCNK SGRPKINDDA PTPVFERLSS DSDGCGDGQD VGSKKAGCSS 120 YKSPGGLVKK RRREFIKQTG CRAKMTVKLT NNKWVVTGVV ADHNHRLIDK PSLTKYLRSH 180 QGIPPEEVEF LEHRCNMDTG RMMTVMFEFC GQAAIVLHDE NDKQHEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-15 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG036350.1 |