PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG031020.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 1002aa MW: 109965 Da PI: 5.2117

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG031020.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.6	3.3e-09	50	78	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+WT+eEd++l +av+ + g++Wk+I TRIDC3BG031020.6 50 KGNWTPEEDDILSRAVQTYNGKNWKKIEP 78 79*************************75 PP
2	Myb_DNA-binding	61.1	2.3e-19	122	168	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3BG031020.6 122 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 168 79****************************.***********97 PP
3	Myb_DNA-binding	49	1.4e-15	174	216	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3BG031020.6 174 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 216 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1002 aa Download sequence
MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI 60 LSRAVQTYNG KNWKKIEPKI AGQTHPPQLV CSGCQKAECF PDRTDVQCLH RWQKVLNPEL 120 IKGPWSKEED DIIVEMVKKY GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE 180 EEITLIHAHR MYGNKWAELT KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL 240 IEHHAHFNSS PAITQQNSED SDSNAVREVE DSSGCSQSSL AMVSCSQVQD TNLALSCDLH 300 VNADTSKTEA RDSQSSMCQE DYTSTEGAAS ALSEVHCHAS SSRFGPDKLL QQDISQRMNL 360 QMDIDEIPGN SMFENNQTIC STSNNERPML QYEIAPDMPI SVLTNVSGAE QKLHFMSEAD 420 FSSPNCLKSE LWQEISFQSL LSGPDIVDAD SLSRLNHHSD THSSEADTNF LAAPNPSHTS 480 NPSSMMVAAY GQDPSLSVPQ SLISNGLSDA ADEKSGEMQV SGSEMITCMH DSFGDSEQFA 540 TPGSTDGRHG ASAIIERIPE YGDKQLTDAE EPAASMAKEP PLAQGEAASD EKQDKGALFY 600 EPPRFPSMDV PFVSCDLVTS GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV 660 LKSAAKSFIS TPSILKKRPR DLSSPTPEKR MERKSRTEQD SGVLGTSSVS AQTSCMHAIK 720 DKAIVTESVL CTNRSSSFKP LEKKLEFCDE NKEILGESEQ AKDGRNAQNN HTVDEHARGE 780 QCSTANMVNT NDEPPATVLV EHKDNDISDH GANAMYQKMN TNLEALSACK EAFAKSKSGE 840 LIAEKSSPCI QMDYEYVNIL ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD 900 ALGLMKRINV QSASALADAR EVLASGSQCG NKIFDEENKE NIDAENETGT GKPQNKIMAE 960 ARVLDFNECA TPVRTADNSV GGSLTKSVSS PIPSSHLLKN FR

Sequence ? help Back to Top

Protein Sequence Length: 1002 aa Download sequence

MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI  60
LSRAVQTYNG KNWKKIEPKI AGQTHPPQLV CSGCQKAECF PDRTDVQCLH RWQKVLNPEL  120
IKGPWSKEED DIIVEMVKKY GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE  180
EEITLIHAHR MYGNKWAELT KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL  240
IEHHAHFNSS PAITQQNSED SDSNAVREVE DSSGCSQSSL AMVSCSQVQD TNLALSCDLH  300
VNADTSKTEA RDSQSSMCQE DYTSTEGAAS ALSEVHCHAS SSRFGPDKLL QQDISQRMNL  360
QMDIDEIPGN SMFENNQTIC STSNNERPML QYEIAPDMPI SVLTNVSGAE QKLHFMSEAD  420
FSSPNCLKSE LWQEISFQSL LSGPDIVDAD SLSRLNHHSD THSSEADTNF LAAPNPSHTS  480
NPSSMMVAAY GQDPSLSVPQ SLISNGLSDA ADEKSGEMQV SGSEMITCMH DSFGDSEQFA  540
TPGSTDGRHG ASAIIERIPE YGDKQLTDAE EPAASMAKEP PLAQGEAASD EKQDKGALFY  600
EPPRFPSMDV PFVSCDLVTS GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV  660
LKSAAKSFIS TPSILKKRPR DLSSPTPEKR MERKSRTEQD SGVLGTSSVS AQTSCMHAIK  720
DKAIVTESVL CTNRSSSFKP LEKKLEFCDE NKEILGESEQ AKDGRNAQNN HTVDEHARGE  780
QCSTANMVNT NDEPPATVLV EHKDNDISDH GANAMYQKMN TNLEALSACK EAFAKSKSGE  840
LIAEKSSPCI QMDYEYVNIL ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD  900
ALGLMKRINV QSASALADAR EVLASGSQCG NKIFDEENKE NIDAENETGT GKPQNKIMAE  960
ARVLDFNECA TPVRTADNSV GGSLTKSVSS PIPSSHLLKN FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-101	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG031020.6