PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG031020.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 885aa    MW: 97490.2 Da    PI: 5.2159
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG031020.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.95.7e-1956102148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+WT+eEd++l +av+ + g++Wk+Ia++++  Rt+ qc +rwqk+l
  TRIDC3BG031020.4  56 KGNWTPEEDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 102
                       79******************************.************986 PP
2Myb_DNA-binding61.31.9e-19108154148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l
  TRIDC3BG031020.4 108 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 154
                       79******************************.*************97 PP
3Myb_DNA-binding49.21.2e-15160202145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       +++WT+eE+  l++a++++G++ W+   + ++ gRt++++k++w+
  TRIDC3BG031020.4 160 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 202
                       679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 885 aa     Download sequence    
IQSSPVMTSD KGKASKKAGE ASGQPSTTHE GKVSNEPQRQ RSLNGRTTGP TRRSTKGNWT  60
PEEDDILSRA VQTYNGKNWK KIAECFPDRT DVQCLHRWQK VLNPELIKGP WSKEEDDIIV  120
EMVKKYGPKK WSTIAQALPG RIGKQCRERW HNHLNPGINK DAWTQEEEIT LIHAHRMYGN  180
KWAELTKFLP GRTDNSIKNH WNSSVKKKID SYMSSGLLAQ VSRLPLIEHH AHFNSSPAIT  240
QQNSEDSDSN AVREVEDSSG CSQSSLAMVS CSQVQDTNLA LSCDLHVNAD TSKTEARDSQ  300
SSMCQEDYTS TEGAASALSE VHCHASSSRF GPDKLLQQDI SQRMNLQMDI DEIPGNSMFE  360
NNQTICSTSN NERPMLQYEI APDMPISVLT NVSGAEQKLH FMSEADFSSP NCLKSELWQE  420
ISFQSLLSGP DIVDADSLSR LNHHSDTHSS EADTNFLAAP NPSHTSNPSS MMVAAYGQDP  480
SLSVPQSLIS NGLSDAADEK SGEMQVSGSE MITCMHDSFG DSEQFATPGS TDGRHGASAI  540
IERIPEYGDK QLTDAEEPAA SMAKEPPLAQ GEAASDEKQD KGALFYEPPR FPSMDVPFVS  600
CDLVTSGDLQ EYSPLGIRQL MRSTMSVTTP LRLWGSPTHD ESPDVVLKSA AKSFISTPSI  660
LKKRPRDLSS PTPEKRMERK SRTEQDSGVL GTSSVSAQTS CMHAIKDKAI VTESVLCTNR  720
SSSFKPLEKK LEFCDENKEI LGESEQAKDG RNAQNNHTVD EHARGEQCST ANMVNTNDEP  780
PATVLVEHKD NDISDHGANA MYQKMNTNLE ALSACKEAFA KSKSGELIAE KSSPCIQMDY  840
EYVNILADTP GVKRGLESPS AWKSPWFIDM QYKGVILHQP SGYNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.11e-106MYB family protein