PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG028580.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 610aa    MW: 67608.1 Da    PI: 8.1885
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG028580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.48.3e-511382651128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGf FhP+d elv +yLkkk+ g+k+e  ++i+evdiyk+ePwdLp+  +v +++++w+fF+ rd+ky++g r+nrat +gyWk+tgkd++
  TRIDC3BG028580.1 138 LPPGFGFHPKDTELVAHYLKKKILGQKIEY-DIIPEVDIYKHEPWDLPAkcNVPTQDNKWHFFAARDRKYPNGARSNRATVAGYWKSTGKDRA 229
                       79****************************.99***************5346667999*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++ +++++g+kktLvf++gr p+g++t+W+mhey +
  TRIDC3BG028580.1 230 IKV-DKRTIGTKKTLVFHEGRPPTGKRTEWIMHEYYI 265
                       ***.999****************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    
QARFLAASSR SPSSSSSHPT SHLTRPASHS LFQPPLAASA SAGKRHSTTP RPPHPPASQP  60
SQRLDRFLRP PRPLRLHRLF RDPLPPAVFR PWPQLRLPPA GYRSPLRSIG RGYVPAPARL  120
CSPHHRSYTM ETLRDMALPP GFGFHPKDTE LVAHYLKKKI LGQKIEYDII PEVDIYKHEP  180
WDLPAKCNVP TQDNKWHFFA ARDRKYPNGA RSNRATVAGY WKSTGKDRAI KVDKRTIGTK  240
KTLVFHEGRP PTGKRTEWIM HEYYIDENEC QSCPDMKDAF VLCKVTKRID WTSENGNEVG  300
NNNPQPQQAN VAAILAVSVE QPDTAASSII GDELPSDAAT VAIPAHMTPD GSDDLKEWLE  360
ELLDTSFDPS ANTAVDSVSA QLSPDEQNAE SSNIGAMAPK VELDYASPNQ TVVDDTDFLL  420
PDDIHSMLYP GSDDFTSWQQ TYFTAADPFS LSNNFMDEFQ MKELQLPLEN NGPNLYEPAD  480
TGIVVRTRHG GTSAASVPPY KARLQQSLGR MVTSSSESIN QTIKFVDNNG HLDLMTNVKH  540
QKKHVRDITC ARQSDAEKCG SHNNQGFFRG VQRAFRGCSA TGLNILVALC MVGVAAAILH  600
HGRHRGGISL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.16e-65NAC family protein