PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG028580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 610aa MW: 67608.1 Da PI: 8.1885

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG028580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.4	8.3e-51	138	265	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGf FhP+d elv +yLkkk+ g+k+e ++i+evdiyk+ePwdLp+ +v +++++w+fF+ rd+ky++g r+nrat +gyWk+tgkd++ TRIDC3BG028580.1 138 LPPGFGFHPKDTELVAHYLKKKILGQKIEY-DIIPEVDIYKHEPWDLPAkcNVPTQDNKWHFFAARDRKYPNGARSNRATVAGYWKSTGKDRA 229 79**************************.99***********5346667999******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +++++g+kktLvf++gr p+g++t+W+mhey + TRIDC3BG028580.1 230 IKV-DKRTIGTKKTLVFHEGRPPTGKRTEWIMHEYYI 265 .999***************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
QARFLAASSR SPSSSSSHPT SHLTRPASHS LFQPPLAASA SAGKRHSTTP RPPHPPASQP 60 SQRLDRFLRP PRPLRLHRLF RDPLPPAVFR PWPQLRLPPA GYRSPLRSIG RGYVPAPARL 120 CSPHHRSYTM ETLRDMALPP GFGFHPKDTE LVAHYLKKKI LGQKIEYDII PEVDIYKHEP 180 WDLPAKCNVP TQDNKWHFFA ARDRKYPNGA RSNRATVAGY WKSTGKDRAI KVDKRTIGTK 240 KTLVFHEGRP PTGKRTEWIM HEYYIDENEC QSCPDMKDAF VLCKVTKRID WTSENGNEVG 300 NNNPQPQQAN VAAILAVSVE QPDTAASSII GDELPSDAAT VAIPAHMTPD GSDDLKEWLE 360 ELLDTSFDPS ANTAVDSVSA QLSPDEQNAE SSNIGAMAPK VELDYASPNQ TVVDDTDFLL 420 PDDIHSMLYP GSDDFTSWQQ TYFTAADPFS LSNNFMDEFQ MKELQLPLEN NGPNLYEPAD 480 TGIVVRTRHG GTSAASVPPY KARLQQSLGR MVTSSSESIN QTIKFVDNNG HLDLMTNVKH 540 QKKHVRDITC ARQSDAEKCG SHNNQGFFRG VQRAFRGCSA TGLNILVALC MVGVAAAILH 600 HGRHRGGISL

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

QARFLAASSR SPSSSSSHPT SHLTRPASHS LFQPPLAASA SAGKRHSTTP RPPHPPASQP  60
SQRLDRFLRP PRPLRLHRLF RDPLPPAVFR PWPQLRLPPA GYRSPLRSIG RGYVPAPARL  120
CSPHHRSYTM ETLRDMALPP GFGFHPKDTE LVAHYLKKKI LGQKIEYDII PEVDIYKHEP  180
WDLPAKCNVP TQDNKWHFFA ARDRKYPNGA RSNRATVAGY WKSTGKDRAI KVDKRTIGTK  240
KTLVFHEGRP PTGKRTEWIM HEYYIDENEC QSCPDMKDAF VLCKVTKRID WTSENGNEVG  300
NNNPQPQQAN VAAILAVSVE QPDTAASSII GDELPSDAAT VAIPAHMTPD GSDDLKEWLE  360
ELLDTSFDPS ANTAVDSVSA QLSPDEQNAE SSNIGAMAPK VELDYASPNQ TVVDDTDFLL  420
PDDIHSMLYP GSDDFTSWQQ TYFTAADPFS LSNNFMDEFQ MKELQLPLEN NGPNLYEPAD  480
TGIVVRTRHG GTSAASVPPY KARLQQSLGR MVTSSSESIN QTIKFVDNNG HLDLMTNVKH  540
QKKHVRDITC ARQSDAEKCG SHNNQGFFRG VQRAFRGCSA TGLNILVALC MVGVAAAILH  600
HGRHRGGISL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	6e-65	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG028580.1