PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG027580.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 270aa    MW: 31124.8 Da    PI: 9.0853
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG027580.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.56.9e-1641120190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         ++r+gC+a++++ +++d+ w++++ +  HnH+l+
  TRIDC3BG027580.6  41 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 120
                       6*****************9999554.478899*******99886555.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MNPNRKSTLE LSLRAYADKK DGPVLCPSIG TSFDSIDEAY EFYNLYSWEC GFGVRLAKSR  60
LNVERKRCMQ EIVCACAGKP IRENSRSSRC GCNAMIRLLR SNDKGWYIAE HKDAHNHPLS  120
LTCGQKLHWK FHRHIDRYTK DLVKQLRDNN VGLGKVFSIV GSFFGSVDNV PFTKRSLKTL  180
CRKLNKEQSD MDAMKMMEIL SEMKANDPDF NYTVQVDKES RVKTLMWVTS KGLDQYRCFG  240
DAITFDTTYR TNLYDMPFGL LLELTITFKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-27FAR1 family protein