PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG027580.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 270aa MW: 31124.8 Da PI: 9.0853 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 50.5 | 6.9e-16 | 41 | 120 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF vr +ks+ + + + +++ vC + gk+ +e+++ ++r+gC+a++++ +++d+ w++++ + HnH+l+ TRIDC3BG027580.5 41 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 120 6*****************9999554.478899*******99886555.........99******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MNPNRKSTLE LSLRAYADKK DGPVLCPSIG TSFDSIDEAY EFYNLYSWEC GFGVRLAKSR 60 LNVERKRCMQ EIVCACAGKP IRENSRSSRC GCNAMIRLLR SNDKGWYIAE HKDAHNHPLS 120 LTCGQKLHWK FHRHIDRYTK DLVKQLRDNN VGLGKVFSIV GSFFGSVDNV PFTKRSLKTL 180 CRKLNKEQSD MDAMKMMEIL SEMKANDPDF NYTVQVDKES RVKTLMWVTS KGLDQYRCFG 240 DAITFDTTYR TNLYDMPFGL LLELTITFKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 2e-27 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG027580.5 |