PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG027580.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 287aa    MW: 33073.1 Da    PI: 9.2219
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG027580.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.37.7e-1658137190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         ++r+gC+a++++ +++d+ w++++ +  HnH+l+
  TRIDC3BG027580.3  58 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 137
                       6*****************9999554.478899*******99886555.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MQLGPRVRIG KAPEEREMNP NRKSTLELSL RAYADKKDGP VLCPSIGTSF DSIDEAYEFY  60
NLYSWECGFG VRLAKSRLNV ERKRCMQEIV CACAGKPIRE NSRSSRCGCN AMIRLLRSND  120
KGWYIAEHKD AHNHPLSLTC GQKLHWKFHR HIDRYTKDLV KQLRDNNVGL GKVFSIVGSF  180
FGSVDNVPFT KRSLKTLCRK LNKEQSDMDA MKMMEILSEM KANDPDFNYT VQVDKESRVK  240
TLMWVTSKGL DQYRCFGDAI TFDTTYRTNL YDMPFGLLLE LTITFKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.15e-27FAR1 family protein