PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG027580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 347aa MW: 39110.7 Da PI: 8.0691

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG027580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.9	1.1e-15	118	197	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF vr +ks+ + + + +++ vC + gk+ +e+++ ++r+gC+a++++ +++d+ w++++ + HnH+l+ TRIDC3BG027580.1 118 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 197 6***************9999554.478899***99886555.........99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MSTNGVELDG VCAPPAPWNN CAYPVESQDS MSVPTMAFGT GGDAQLVGDA ARAEVCSEAT 60 SGWACRVRIG KAPEEREMNP NRKSTLELSL RAYADKKDGP VLCPSIGTSF DSIDEAYEFY 120 NLYSWECGFG VRLAKSRLNV ERKRCMQEIV CACAGKPIRE NSRSSRCGCN AMIRLLRSND 180 KGWYIAEHKD AHNHPLSLTC GQKLHWKFHR HIDRYTKDLV KQLRDNNVGL GKVFSIVGSF 240 FGSVDNVPFT KRSLKTLCRK LNKEQSDMDA MKMMEILSEM KANDPDFNYT VQVDKESRVK 300 TLMWVTSKGL DQYRCFGDAI TFDTTYRTNL YDMPFGLLLE LTITFKA

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MSTNGVELDG VCAPPAPWNN CAYPVESQDS MSVPTMAFGT GGDAQLVGDA ARAEVCSEAT  60
SGWACRVRIG KAPEEREMNP NRKSTLELSL RAYADKKDGP VLCPSIGTSF DSIDEAYEFY  120
NLYSWECGFG VRLAKSRLNV ERKRCMQEIV CACAGKPIRE NSRSSRCGCN AMIRLLRSND  180
KGWYIAEHKD AHNHPLSLTC GQKLHWKFHR HIDRYTKDLV KQLRDNNVGL GKVFSIVGSF  240
FGSVDNVPFT KRSLKTLCRK LNKEQSDMDA MKMMEILSEM KANDPDFNYT VQVDKESRVK  300
TLMWVTSKGL DQYRCFGDAI TFDTTYRTNL YDMPFGLLLE LTITFKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	7e-27	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG027580.1