PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG027100.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 144aa MW: 15667.6 Da PI: 10.0423 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 77.2 | 1.8e-24 | 71 | 118 | 4 | 51 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rk+ks TRIDC3BG027100.6 71 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKVKS 118 6899*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
PGRRRSHLLL TASIPFTLHT PLPPASNLFM SAPPMAASAQ ELPPAEQAPS LALALVPQPQ 60 AQAQIKPTRV SLSYEEISKL FSLPIAEAAS ILGVCTSVLK RICRTHGIVR WPYRKVKSCL 120 GLRLVPEISF VPCYCSINVH LLHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.1 | 3e-11 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG027100.6 |