PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG027100.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 167aa MW: 18405.7 Da PI: 10.4557 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 74.8 | 1e-23 | 20 | 67 | 4 | 51 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rki s TRIDC3BG027100.4 20 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVS 67 6899*****************************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 167 aa Download sequence |
ALALVPQPQA QAQIKPTRVS LSYEEISKLF SLPIAEAASI LGVCTSVLKR ICRTHGIVRW 60 PYRKIVSGKG DDAKNAEREK AMQLLELSKI AKQKAISSSG SLATSKSLKW ACDIIRKDIV 120 QDKMPSHVLT VDKMRQACPS LAKPKTSPPT WMISSTDFHH LACLLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G59580.1 | 6e-11 | Nin-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG027100.4 |