PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG026490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 223aa MW: 24594.9 Da PI: 9.4188 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.8 | 6.4e-51 | 23 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrF+Ptd+e++v+yLk+kv++ ++++i++vdiyk++Pw+Lp k++ +e ew+fFs+rd+ky++g r+nr++ sgyWkatg+d TRIDC3BG026490.1 23 LPPGFRFQPTDQEIIVCYLKRKVASAAsavaSAVTSIIADVDIYKFDPWELPDKAQFGEGEWFFFSPRDRKYPNGARPNRTAGSGYWKATGTD 115 79**********************9996765444568***************99999999********************************* PP NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++l++ + + g+kk Lvfy+gr+p+g+kt+Wvmheyrl TRIDC3BG026490.1 116 KPILAAgGARCLGVKKALVFYQGRSPRGTKTEWVMHEYRL 155 *****9555669**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 223 aa Download sequence |
LRRLRLRASA VMEEGFVFRG CELPPGFRFQ PTDQEIIVCY LKRKVASAAS AVASAVTSII 60 ADVDIYKFDP WELPDKAQFG EGEWFFFSPR DRKYPNGARP NRTAGSGYWK ATGTDKPILA 120 AGGARCLGVK KALVFYQGRS PRGTKTEWVM HEYRLLHADA GAATRHKPHD SMRLDDWVLC 180 RVRKKGVAVA PDMDGNPGAP SHAEVQAIDS TTAAAHGAFG DDW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-71 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG026490.1 |