PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026280.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 615aa MW: 67140.6 Da PI: 7.2422

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026280.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.6e-13	461	507	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3BG026280.3 461 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 507 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
KMEVEEDGAN GGNGGAWTEE DRDLSTTVLG RDAFAYLTKG GGTISEGLVA ASSPVDLQNK 60 LQELIESEHP GAGWNYAIFW QLSRTKSGDL VLGWGDGSCR EPNDAELAAA ASAGNDDAKQ 120 RMRKRVLQRL HKAFGGADEE DYAPTIGQVT DTEMFFLASM YFAFPRRAGA PGQVFAAGLP 180 LWVPNSERNV FPANYCYRGY LASTAGFRTI LLVPFETGVL ELGSMQQVAE SSDTLQTIKS 240 VFAGTGGNKD IIPSREGNGH IERSPGLAKI FGKDLNLGRS SAGPVIGASK VDERPWEQRT 300 AGGGSSLLPN VQKGLQSFTW SQARGLNSHQ QKFGNGILIV SNEATHGNNR AADSSTTTQF 360 QLQKAPQLQK LPLLQKPPQL VKPLQMVNQQ QLQPQAPRQI DFSAGTSSKS GVLVTRAAVL 420 DGDSSEVNGL CKEEGTTPVI EDRRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL 480 RAVVPNISKM DKASLLGDAI AYITDLQKKL KDMETERERF LESGMVDPRE RAPRPEVDIQ 540 VVQDEVLVRV MSPLENHPIK KVFEAFEEAD VRVGESKLTG NNGTVVHSFI IKCPGSEQQT 600 REKVIAAMSR AMSSV

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

KMEVEEDGAN GGNGGAWTEE DRDLSTTVLG RDAFAYLTKG GGTISEGLVA ASSPVDLQNK  60
LQELIESEHP GAGWNYAIFW QLSRTKSGDL VLGWGDGSCR EPNDAELAAA ASAGNDDAKQ  120
RMRKRVLQRL HKAFGGADEE DYAPTIGQVT DTEMFFLASM YFAFPRRAGA PGQVFAAGLP  180
LWVPNSERNV FPANYCYRGY LASTAGFRTI LLVPFETGVL ELGSMQQVAE SSDTLQTIKS  240
VFAGTGGNKD IIPSREGNGH IERSPGLAKI FGKDLNLGRS SAGPVIGASK VDERPWEQRT  300
AGGGSSLLPN VQKGLQSFTW SQARGLNSHQ QKFGNGILIV SNEATHGNNR AADSSTTTQF  360
QLQKAPQLQK LPLLQKPPQL VKPLQMVNQQ QLQPQAPRQI DFSAGTSSKS GVLVTRAAVL  420
DGDSSEVNGL CKEEGTTPVI EDRRPRKRGR KPANGREEPL NHVEAERQRR EKLNQRFYAL  480
RAVVPNISKM DKASLLGDAI AYITDLQKKL KDMETERERF LESGMVDPRE RAPRPEVDIQ  540
VVQDEVLVRV MSPLENHPIK KVFEAFEEAD VRVGESKLTG NNGTVVHSFI IKCPGSEQQT  600
REKVIAAMSR AMSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	443	451	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	4e-62	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026280.3