PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026280.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 647aa MW: 70444.5 Da PI: 7.9886

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	493	539	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3BG026280.1 493 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 539 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
RSGLGVAGLP ALDFASPLPI RARDPRSGLM VMKMEVEEDG ANGGNGGAWT EEDRDLSTTV 60 LGRDAFAYLT KGGGTISEGL VAASSPVDLQ NKLQELIESE HPGAGWNYAI FWQLSRTKSG 120 DLVLGWGDGS CREPNDAELA AAASAGNDDA KQRMRKRVLQ RLHKAFGGAD EEDYAPTIGQ 180 VTDTEMFFLA SMYFAFPRRA GAPGQVFAAG LPLWVPNSER NVFPANYCYR GYLASTAGFR 240 TILLVPFETG VLELGSMQQV AESSDTLQTI KSVFAGTGGN KDIIPSREGN GHIERSPGLA 300 KIFGKDLNLG RSSAGPVIGA SKVDERPWEQ RTAGGGSSLL PNVQKGLQSF TWSQARGLNS 360 HQQKFGNGIL IVSNEATHGN NRAADSSTTT QFQLQKAPQL QKLPLLQKPP QLVKPLQMVN 420 QQQLQPQAPR QIDFSAGTSS KSGVLVTRAA VLDGDSSEVN GLCKEEGTTP VIEDRRPRKR 480 GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD AIAYITDLQK 540 KLKDMETERE RFLESGMVDP RERAPRPEVD IQVVQDEVLV RVMSPLENHP IKKVFEAFEE 600 ADVRVGESKL TGNNGTVVHS FIIKCPGSEQ QTREKVIAAM SRAMSSV

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

RSGLGVAGLP ALDFASPLPI RARDPRSGLM VMKMEVEEDG ANGGNGGAWT EEDRDLSTTV  60
LGRDAFAYLT KGGGTISEGL VAASSPVDLQ NKLQELIESE HPGAGWNYAI FWQLSRTKSG  120
DLVLGWGDGS CREPNDAELA AAASAGNDDA KQRMRKRVLQ RLHKAFGGAD EEDYAPTIGQ  180
VTDTEMFFLA SMYFAFPRRA GAPGQVFAAG LPLWVPNSER NVFPANYCYR GYLASTAGFR  240
TILLVPFETG VLELGSMQQV AESSDTLQTI KSVFAGTGGN KDIIPSREGN GHIERSPGLA  300
KIFGKDLNLG RSSAGPVIGA SKVDERPWEQ RTAGGGSSLL PNVQKGLQSF TWSQARGLNS  360
HQQKFGNGIL IVSNEATHGN NRAADSSTTT QFQLQKAPQL QKLPLLQKPP QLVKPLQMVN  420
QQQLQPQAPR QIDFSAGTSS KSGVLVTRAA VLDGDSSEVN GLCKEEGTTP VIEDRRPRKR  480
GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLGD AIAYITDLQK  540
KLKDMETERE RFLESGMVDP RERAPRPEVD IQVVQDEVLV RVMSPLENHP IKKVFEAFEE  600
ADVRVGESKL TGNNGTVVHS FIIKCPGSEQ QTREKVIAAM SRAMSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	475	483	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026280.1