PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC3BG026190.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 299aa MW: 33803.9 Da PI: 8.6929

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026190.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.7	9.4e-23	116	216	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+ltpsd++++g +++ +++a+e+ ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v ++ TRIDC3BG026190.6 116 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 205 99**************************97444.44569*******************************************999..44 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 +++e +v+v+r TRIDC3BG026190.6 206 ETGEQRVGVRR 216 77778999997 PP
2	Auxin_resp	67.7	4e-23	242	298	1	57
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsser 57 a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ + TRIDC3BG026190.6 242 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVK 298 789**************************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
AGRGRDPELF AELWRACAGP LVEVPQRGER VFYFLQGHLE QLQEPTDSAL LAEQIKMFQV 60 PYKILCKVVN VELKAEAETD EVYAQITLQP ESDQDNLPLI CDPILPETPR PVVHTFCKIL 120 TPSDTSTHGG FSVLRRHANE CLPPLDMAMP TPTQEIISKD LHGSEWRFKH IYRGQPRRHL 180 LTTGWSTFVT SKKLMAGDAF VYLRSETGEQ RVGVRRLVQK QSTMPASVIS SQSMHLGVLA 240 SASHALKTNS IFVVYYRPRL SQSQYIVSVN KYLQASKTGF TVGMRFRMNF EAEDVPVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	1e-149	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026190.6