PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026110.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 915aa MW: 100466 Da PI: 6.215

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026110.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5e-29	565	616	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3BG026110.7 565 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 616 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
PFDSLTTSLF FSSVSSSPPL HPLPVASSSW LTPPSPLWLF EDRQMMPIEA GPAPAAAPDN 60 TAAVAEEAQR ARSGNSDTPI KKTERLNNKW QFNLALHDDS TNSSCLFKEK LTHALRYFKE 120 STDQHLLVQV WAPVKSGDRY VLTTSGQPFV LDHQSIGLLQ YRAVSMMYMF SVDGDNAGEL 180 GLPGRVYKQK VPEWTPNVQY YSSTEYPRLN HAISYNVHGT VALPVFDPSV QSCIAVVELI 240 MTSKKINYAD EVDKVCKALE AVNLKSTEIL EHPNVQICNE GRQSALVEIL EILTVVCEEH 300 KLPLAQTWVP CKYRSVLAHG GGVKKSCLSF DGSCMGEVCM STSDVAFHVI DAHMWGFRDA 360 CVEHHLQKGQ GVSGKAFIYQ RPCFSKDISQ FCKLEYPLVH YARMFGLAGC FAICLQSPYT 420 GDDYYMLEFF LPPSCKEEDD QNALLESILG LINQCLRNLK VAGNGESNEA SLQLSNVIMI 480 ESEDFKTNVH FENSEGFRES PEGETHGGAH EFDKVNSKVS EGHLLADDNS HNNGVSVSRP 540 NGSAASDSSL LHKNGKPPER RRGKAEKTIS LEVLQQYFSG SLKNAAKSLG VCPTTMKRIC 600 RQHGISRWPS RKINKVNRSL SKLKQVIESV QGSDAAFNLT SITGPLPTIP VGPSSDSFNK 660 EKASESKAEH SNRAVDGDRD SSLQKSQENG SHFGALMSQQ GFADTGNNVQ LEADKASLSR 720 SSSGEGSINS RTSEGSCQGS PTNQTFVCQP IASMFLEPQE PQLNPEGFTK EPFQEPELPL 780 SRMLIEDSGS SKDLKNLFGS AIGQPMLAPP SNFGPMRNSG TVTIKASFKE DIVRFRFQCS 840 SSVMALKDEV AKRLRMDAGM FDIKYLDDDH EWVKLACNAD LEECIEISRH SGTHVIRLLV 900 SDVAAHIGSS CGSSG

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

PFDSLTTSLF FSSVSSSPPL HPLPVASSSW LTPPSPLWLF EDRQMMPIEA GPAPAAAPDN  60
TAAVAEEAQR ARSGNSDTPI KKTERLNNKW QFNLALHDDS TNSSCLFKEK LTHALRYFKE  120
STDQHLLVQV WAPVKSGDRY VLTTSGQPFV LDHQSIGLLQ YRAVSMMYMF SVDGDNAGEL  180
GLPGRVYKQK VPEWTPNVQY YSSTEYPRLN HAISYNVHGT VALPVFDPSV QSCIAVVELI  240
MTSKKINYAD EVDKVCKALE AVNLKSTEIL EHPNVQICNE GRQSALVEIL EILTVVCEEH  300
KLPLAQTWVP CKYRSVLAHG GGVKKSCLSF DGSCMGEVCM STSDVAFHVI DAHMWGFRDA  360
CVEHHLQKGQ GVSGKAFIYQ RPCFSKDISQ FCKLEYPLVH YARMFGLAGC FAICLQSPYT  420
GDDYYMLEFF LPPSCKEEDD QNALLESILG LINQCLRNLK VAGNGESNEA SLQLSNVIMI  480
ESEDFKTNVH FENSEGFRES PEGETHGGAH EFDKVNSKVS EGHLLADDNS HNNGVSVSRP  540
NGSAASDSSL LHKNGKPPER RRGKAEKTIS LEVLQQYFSG SLKNAAKSLG VCPTTMKRIC  600
RQHGISRWPS RKINKVNRSL SKLKQVIESV QGSDAAFNLT SITGPLPTIP VGPSSDSFNK  660
EKASESKAEH SNRAVDGDRD SSLQKSQENG SHFGALMSQQ GFADTGNNVQ LEADKASLSR  720
SSSGEGSINS RTSEGSCQGS PTNQTFVCQP IASMFLEPQE PQLNPEGFTK EPFQEPELPL  780
SRMLIEDSGS SKDLKNLFGS AIGQPMLAPP SNFGPMRNSG TVTIKASFKE DIVRFRFQCS  840
SSVMALKDEV AKRLRMDAGM FDIKYLDDDH EWVKLACNAD LEECIEISRH SGTHVIRLLV  900
SDVAAHIGSS CGSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026110.7