PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026110.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 549aa MW: 60959 Da PI: 6.423

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026110.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	23.4	1.2e-07	502	527	1	26
RWP-RK 1 aekeisledlskyFslpikdAAkeLg 26 aek+isle+l++yFs+++k+AAk+Lg TRIDC3BG026110.2 502 AEKTISLEVLQQYFSGSLKNAAKSLG 527 589**********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
VAEEAQRARS GNSDTPIKKT ERLNNKWQFN LALHDDSTNS SCLFKEKLTH ALRYFKESTD 60 QHLLVQVWAP VKSGDRYVLT TSGQPFVLDH QSIGLLQYRA VSMMYMFSVD GDNAGELGLP 120 GRVYKQKVPE WTPNVQYYSS TEYPRLNHAI SYNVHGTVAL PVFDPSVQSC IAVVELIMTS 180 KKINYADEVD KVCKALEAVN LKSTEILEHP NVQICNEGRQ SALVEILEIL TVVCEEHKLP 240 LAQTWVPCKY RSVLAHGGGV KKSCLSFDGS CMGEVCMSTS DVAFHVIDAH MWGFRDACVE 300 HHLQKGQGVS GKAFIYQRPC FSKDISQFCK LEYPLVHYAR MFGLAGCFAI CLQSPYTGDD 360 YYMLEFFLPP SCKEEDDQNA LLESILGLIN QCLRNLKVAG NGESNEASLQ LSNVIMIESE 420 DFKTNVHFEN SEGFRESPEG ETHGGAHEFD KVNSKVSEGH LLADDNSHNN GVSVSRPNGS 480 AASDSSLLHK NGKPPERRRG KAEKTISLEV LQQYFSGSLK NAAKSLGGTL LIFSLLSKQI 540 LGFSSLNSF

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

VAEEAQRARS GNSDTPIKKT ERLNNKWQFN LALHDDSTNS SCLFKEKLTH ALRYFKESTD  60
QHLLVQVWAP VKSGDRYVLT TSGQPFVLDH QSIGLLQYRA VSMMYMFSVD GDNAGELGLP  120
GRVYKQKVPE WTPNVQYYSS TEYPRLNHAI SYNVHGTVAL PVFDPSVQSC IAVVELIMTS  180
KKINYADEVD KVCKALEAVN LKSTEILEHP NVQICNEGRQ SALVEILEIL TVVCEEHKLP  240
LAQTWVPCKY RSVLAHGGGV KKSCLSFDGS CMGEVCMSTS DVAFHVIDAH MWGFRDACVE  300
HHLQKGQGVS GKAFIYQRPC FSKDISQFCK LEYPLVHYAR MFGLAGCFAI CLQSPYTGDD  360
YYMLEFFLPP SCKEEDDQNA LLESILGLIN QCLRNLKVAG NGESNEASLQ LSNVIMIESE  420
DFKTNVHFEN SEGFRESPEG ETHGGAHEFD KVNSKVSEGH LLADDNSHNN GVSVSRPNGS  480
AASDSSLLHK NGKPPERRRG KAEKTISLEV LQQYFSGSLK NAAKSLGGTL LIFSLLSKQI  540
LGFSSLNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026110.2