PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG026110.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 873aa MW: 96363 Da PI: 6.6188

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG026110.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.8e-29	523	574	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3BG026110.10 523 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 574 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
LTNYMALRNI FSVCEIGIAR HILTLAQCVR LRNSDTPIKK TERLNNKWQF NLALHDDSTN 60 SSCLFKEKLT HALRYFKEST DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR 120 AVSMMYMFSV DGDNAGELGL PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA 180 LPVFDPSVQS CIAVVELIMT SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR 240 QSALVEILEI LTVVCEEHKL PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST 300 SDVAFHVIDA HMWGFRDACV EHHLQKGQGV SGKAFIYQRP CFSKDISQFC KLEYPLVHYA 360 RMFGLAGCFA ICLQSPYTGD DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA 420 GNGESNEASL QLSNVIMIES EDFKTNVHFE NSEGFRESPE GETHGGAHEF DKVNSKVSEG 480 HLLADDNSHN NGVSVSRPNG SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL 540 KNAAKSLGVC PTTMKRICRQ HGISRWPSRK INKVNRSLSK LKQVIESVQG SDAAFNLTSI 600 TGPLPTIPVG PSSDSFNKEK ASESKAEHSN RAVDGDRDSS LQKSQENGSH FGALMSQQGF 660 ADTGNNVQLE ADKASLSRSS SGEGSINSRT SEGSCQGSPT NQTFVCQPIA SMFLEPQEPQ 720 LNPEGFTKEP FQEPELPLSR MLIEDSGSSK DLKNLFGSAI GQPMLAPPSN FGPMRNSGTV 780 TIKASFKEDI VRFRFQCSSS VMALKDEVAK RLRMDAGMFD IKYLDDDHEW VKLACNADLE 840 ECIEISRHSG THVIRLLVSD VAAHIGSSCG SSG

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

LTNYMALRNI FSVCEIGIAR HILTLAQCVR LRNSDTPIKK TERLNNKWQF NLALHDDSTN  60
SSCLFKEKLT HALRYFKEST DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR  120
AVSMMYMFSV DGDNAGELGL PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA  180
LPVFDPSVQS CIAVVELIMT SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR  240
QSALVEILEI LTVVCEEHKL PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST  300
SDVAFHVIDA HMWGFRDACV EHHLQKGQGV SGKAFIYQRP CFSKDISQFC KLEYPLVHYA  360
RMFGLAGCFA ICLQSPYTGD DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA  420
GNGESNEASL QLSNVIMIES EDFKTNVHFE NSEGFRESPE GETHGGAHEF DKVNSKVSEG  480
HLLADDNSHN NGVSVSRPNG SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL  540
KNAAKSLGVC PTTMKRICRQ HGISRWPSRK INKVNRSLSK LKQVIESVQG SDAAFNLTSI  600
TGPLPTIPVG PSSDSFNKEK ASESKAEHSN RAVDGDRDSS LQKSQENGSH FGALMSQQGF  660
ADTGNNVQLE ADKASLSRSS SGEGSINSRT SEGSCQGSPT NQTFVCQPIA SMFLEPQEPQ  720
LNPEGFTKEP FQEPELPLSR MLIEDSGSSK DLKNLFGSAI GQPMLAPPSN FGPMRNSGTV  780
TIKASFKEDI VRFRFQCSSS VMALKDEVAK RLRMDAGMFD IKYLDDDHEW VKLACNADLE  840
ECIEISRHSG THVIRLLVSD VAAHIGSSCG SSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG026110.10