PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG024070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 187aa MW: 21468.4 Da PI: 8.7147 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 45 | 3.5e-14 | 27 | 106 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF +r ks+ + + + +++ vC ++gk+++ ++ + r++C a++++ +++d+ w++++ + HnH l+ TRIDC3BG024070.1 27 DFYNLYSWEIGFGIRYGKSRLNVERT-KCMQEIVCGCSGKPKRGNT---------RTCRCECPAMIRLLRSNDNGWYISEHRPSHNHVLT 106 6*****************99995544.67899*******9988654.........589*****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
GYAEKRTDTV VVPAVGYTFD SLGEAYDFYN LYSWEIGFGI RYGKSRLNVE RTKCMQEIVC 60 GCSGKPKRGN TRTCRCECPA MIRLLRSNDN GWYISEHRPS HNHVLTDKCG EKVYWPSHKH 120 IDMYTRDIVK QLRENNISIG KVYNIIGSFF GSMNNVPFTK RALRGLCGEI SRDQADDDVR 180 KTMDVFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 1e-12 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG024070.1 |