PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG023500.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 385aa MW: 40259.8 Da PI: 6.34

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG023500.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.3	1.4e-34	18	114	2	83
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l + ++++s+++++s TRIDC3BG023500.4 18 TGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKLDTLpawqptavapaasnaAAPPSSSTQPDSAD 110 79**************************************************************66665555544433322222222222222 PP TCP 80 ssas 83 +s++ TRIDC3BG023500.4 111 NSDD 114 2222 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
GGGGEIVAVQ GGHIVRSTGR KDRHSKVCTA RGPRDRRVRL SAHTAIQFYD VQDRLGYDRP 60 SKAVDWLIKN AKDAIDKLDT LPAWQPTAVA PAASNAAAPP SSSTQPDSAD NSDDQAQAIT 120 IAHSSFDFAG SGGAGGATGG ISFLPPSLDS DSIADTIKSF FPMGGTTGGE PSSSTVAAHS 180 SAMGFQGYTP DLLSRTGSQS QELRLSLQPL PDPMFHHHQQ QEQHRSDGHD GNGTAQQTLF 240 PGAASYSFGG GGAMWGEQAA SQRMMPWNVP DPGGGSTGGY LFNVSQQAAH MQAALSGQSQ 300 FFFQRGPLQS SNQPSDRGWP ETVEADDNNP MQQHQGGLNP SVSAIGFGPG VSFSGFRVPA 360 RMQGNEEHNG GNGDKPPSVS SASHH

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

GGGGEIVAVQ GGHIVRSTGR KDRHSKVCTA RGPRDRRVRL SAHTAIQFYD VQDRLGYDRP  60
SKAVDWLIKN AKDAIDKLDT LPAWQPTAVA PAASNAAAPP SSSTQPDSAD NSDDQAQAIT  120
IAHSSFDFAG SGGAGGATGG ISFLPPSLDS DSIADTIKSF FPMGGTTGGE PSSSTVAAHS  180
SAMGFQGYTP DLLSRTGSQS QELRLSLQPL PDPMFHHHQQ QEQHRSDGHD GNGTAQQTLF  240
PGAASYSFGG GGAMWGEQAA SQRMMPWNVP DPGGGSTGGY LFNVSQQAAH MQAALSGQSQ  300
FFFQRGPLQS SNQPSDRGWP ETVEADDNNP MQQHQGGLNP SVSAIGFGPG VSFSGFRVPA  360
RMQGNEEHNG GNGDKPPSVS SASHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-38	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG023500.4