PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG022260.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 349aa MW: 37435.8 Da PI: 5.0816

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG022260.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.4	1.9e-05	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e e++ C ++ lC+ C H H + TRIDC3BG022260.3 4 LCSACEAAEARVLCCADEAALCARCDRDVHDAnrlagkHHR 44 7****99****************99944667777554 PP
2	zf-B_box	28.7	2.7e-09	59	99	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +++C+ ++e ++ +fC +++ llC++C ++ H H TRIDC3BG022260.3 59 APNCDICQEGHAYFFCVEDRALLCRSCDVAVHTAnafvsaH 99 689****88*****************99545566666 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MKVLCSACEA AEARVLCCAD EAALCARCDR DVHDANRLAG KHHRLPLLSA ASNPPAVSAP 60 NCDICQEGHA YFFCVEDRAL LCRSCDVAVH TANAFVSAHR RFLLTGVQVG LEPDEQEEPV 120 PEPEPEPQPP NNASSAPLPP PMCHRKRSPT PLYSDGDIDW AAGPDVGITG NLPDWSVIDE 180 QFGSGTPALR PAEPEVIKAP PRKSPRVAVT AASAALFGGS MPDWPLDEFF GFTEFNSGFG 240 FAENGTSKAD SGKLSSPNRR SMSSSSSGNA TQNAQDFFGQ VPEVHWSRST MPELPSPPTA 300 SGLHWQGDPH YGPASDSAAV FVPDICSPEN PFRCFTAGAD QQLKRRRRC

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MKVLCSACEA AEARVLCCAD EAALCARCDR DVHDANRLAG KHHRLPLLSA ASNPPAVSAP  60
NCDICQEGHA YFFCVEDRAL LCRSCDVAVH TANAFVSAHR RFLLTGVQVG LEPDEQEEPV  120
PEPEPEPQPP NNASSAPLPP PMCHRKRSPT PLYSDGDIDW AAGPDVGITG NLPDWSVIDE  180
QFGSGTPALR PAEPEVIKAP PRKSPRVAVT AASAALFGGS MPDWPLDEFF GFTEFNSGFG  240
FAENGTSKAD SGKLSSPNRR SMSSSSSGNA TQNAQDFFGQ VPEVHWSRST MPELPSPPTA  300
SGLHWQGDPH YGPASDSAAV FVPDICSPEN PFRCFTAGAD QQLKRRRRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	1e-52	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG022260.3