PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG018420.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1035aa MW: 116535 Da PI: 7.9534

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG018420.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.7	4.7e-14	34	85	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3BG018420.6 34 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 85 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1035 aa Download sequence
VGTSLPRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV QYPKPEDLTE 60 YAASVGLTYN QVRIWFKERR RKERRHIEAA EVYMETQATA RSNWPRCSSS RSSNSSQSPM 120 QDTTGHHSYQ DQSVLKKRKI MSPTAQRFTL PFENNDPVRK HGKGKGLMTV WHAMYSQTAE 180 IQDCSSFIDE TGCLRSLRPF EDFGGKLAQK QTLPRKKVNK KSRSSPSKRK VPCGRVTDLK 240 EHPPVECHLS VDESESSELR TEQATLVDDE ELELSELQAG PNPLRCSAHI SSTGRHGCPL 300 CKDLLARFPP PSVRMKQPFP TKPWESSPEM VKKLFQVVRF VYTHFGSMDV HPFTFDEFAQ 360 AFHDKDSSLL GKVHVSLLKL LMLNTERGSG SVFVPRSSKD SRFSSFLNFV REQEFDVNFW 420 IKSLNSLTWV EILRQVLVAS GFGSDHHMLN RNFFNKEKNQ MVKYGLRPRT LKGELFTLLS 480 KKGSGGLKVA ELAKSPQIIG LNLSGASEVE QLIFSTLSSD ITLFEKIAPC AYRLRVDPRI 540 KGKEDPRSDT EDSGTVDNDG DASSSGDESD GPQESYPEHE SRIVRWRQKN VHKNMNKCSE 600 IDESYSGERW LLGLMEGEYS DLSIDEKLDC LVALIDVVSG AGSVPRLEEP QSVLSNIQRA 660 QSHASGGKIK KCTRTIYQSS DEYLNRPGSS HSFDSSMQGQ SGSLRSQDYI ADSGANESPT 720 GFAHQPQIVL LGSDRRYNNY WLFLGPCRAD DPGHRRVYFE SSEDGHWEVI DSPQDLLSLL 780 SVLDIRGTRE AHLLASMKKR QSCLFEGMKK HLEDGCVVAL TASSDSSRSE TSSGNRYSPK 840 PSSGDGASPL SDIDSASVPI YLAGNLQNAS SAIGIEVGRR SDEKMLKWER LQALDKWIWT 900 SFYSSLTAVK CGKKSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL EERYAIHVAT 960 CREPEDLYDV PNHKVLPSQL QALKAAIHAI EARMPTAAFA GLWMKSSHNL WVKRLRRTSS 1020 LPELLQVSIF FLFTS

Sequence ? help Back to Top

Protein Sequence Length: 1035 aa Download sequence

VGTSLPRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV QYPKPEDLTE  60
YAASVGLTYN QVRIWFKERR RKERRHIEAA EVYMETQATA RSNWPRCSSS RSSNSSQSPM  120
QDTTGHHSYQ DQSVLKKRKI MSPTAQRFTL PFENNDPVRK HGKGKGLMTV WHAMYSQTAE  180
IQDCSSFIDE TGCLRSLRPF EDFGGKLAQK QTLPRKKVNK KSRSSPSKRK VPCGRVTDLK  240
EHPPVECHLS VDESESSELR TEQATLVDDE ELELSELQAG PNPLRCSAHI SSTGRHGCPL  300
CKDLLARFPP PSVRMKQPFP TKPWESSPEM VKKLFQVVRF VYTHFGSMDV HPFTFDEFAQ  360
AFHDKDSSLL GKVHVSLLKL LMLNTERGSG SVFVPRSSKD SRFSSFLNFV REQEFDVNFW  420
IKSLNSLTWV EILRQVLVAS GFGSDHHMLN RNFFNKEKNQ MVKYGLRPRT LKGELFTLLS  480
KKGSGGLKVA ELAKSPQIIG LNLSGASEVE QLIFSTLSSD ITLFEKIAPC AYRLRVDPRI  540
KGKEDPRSDT EDSGTVDNDG DASSSGDESD GPQESYPEHE SRIVRWRQKN VHKNMNKCSE  600
IDESYSGERW LLGLMEGEYS DLSIDEKLDC LVALIDVVSG AGSVPRLEEP QSVLSNIQRA  660
QSHASGGKIK KCTRTIYQSS DEYLNRPGSS HSFDSSMQGQ SGSLRSQDYI ADSGANESPT  720
GFAHQPQIVL LGSDRRYNNY WLFLGPCRAD DPGHRRVYFE SSEDGHWEVI DSPQDLLSLL  780
SVLDIRGTRE AHLLASMKKR QSCLFEGMKK HLEDGCVVAL TASSDSSRSE TSSGNRYSPK  840
PSSGDGASPL SDIDSASVPI YLAGNLQNAS SAIGIEVGRR SDEKMLKWER LQALDKWIWT  900
SFYSSLTAVK CGKKSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL EERYAIHVAT  960
CREPEDLYDV PNHKVLPSQL QALKAAIHAI EARMPTAAFA GLWMKSSHNL WVKRLRRTSS  1020
LPELLQVSIF FLFTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	165	KKRKIMSPTAQRFTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-114	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG018420.6