PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3BG017660.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 435aa MW: 48418.4 Da PI: 8.5684

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG017660.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.2	1.4e-35	76	218	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+Ptd+el+ e+L++kv+++ ++ e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ TRIDC3BG017660.4 76 LPAGVKFDPTDQELI-EHLEAKVREEGsrshplIN--EFIPTIDgedgICYTHPEKLP-GVTMDGLSKHFFHRPSKAYTTGTRKRRKiqtecd 164 799**********.99**99966754422..23444433445******.455567899**************7566666 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l TRIDC3BG017660.4 165 vhKGETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 218 4433778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
FLPRSPTPSN STRLPSRAHA WTPSPAAACE PGDMNRGHIS SSELIDAKLE EHRISTARHC 60 PNCRHKLDCK PDWLGLPAGV KFDPTDQELI EHLEAKVREE GSRSHPLINE FIPTIDGEDG 120 ICYTHPEKLP GVTMDGLSKH FFHRPSKAYT TGTRKRRKIQ TECDVHKGET RWHKTGKTRP 180 VMANGRQKGC KKILVLYTNF GKHRKPEKTN WVMHQYHLGD LEEEKEGELV VCKIFYQTQP 240 RQCSWSASSD RGGAGGAVAI AASAAVTVQE QRMRDSGSGS SSSRDHEALS ATSYPAGYAM 300 AAAVEMQHLK HSGDHFSFTP FRKSFEEVGI GVDQVPSDQL GRSEHQQHAG QEQQPHRPEL 360 ATTAVPATAF LVSRPTNPIS ATVPPPLQHT SVVLDHDQFH VPAIFLHHEK FQRTCNNNTS 420 TSKRLTAGLL AWKNW

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

FLPRSPTPSN STRLPSRAHA WTPSPAAACE PGDMNRGHIS SSELIDAKLE EHRISTARHC  60
PNCRHKLDCK PDWLGLPAGV KFDPTDQELI EHLEAKVREE GSRSHPLINE FIPTIDGEDG  120
ICYTHPEKLP GVTMDGLSKH FFHRPSKAYT TGTRKRRKIQ TECDVHKGET RWHKTGKTRP  180
VMANGRQKGC KKILVLYTNF GKHRKPEKTN WVMHQYHLGD LEEEKEGELV VCKIFYQTQP  240
RQCSWSASSD RGGAGGAVAI AASAAVTVQE QRMRDSGSGS SSSRDHEALS ATSYPAGYAM  300
AAAVEMQHLK HSGDHFSFTP FRKSFEEVGI GVDQVPSDQL GRSEHQQHAG QEQQPHRPEL  360
ATTAVPATAF LVSRPTNPIS ATVPPPLQHT SVVLDHDQFH VPAIFLHHEK FQRTCNNNTS  420
TSKRLTAGLL AWKNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-113	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG017660.4